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Assembly Name: uagpf v2.0

Name: nucleotide binding

Term: GO:0000166  Help

Source: GO from Blast2go

Ontology: Molecular Function


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
uagpf_v2_unigene13112 uagpf v2.0 576
AutoFact: glycine-rich RNA-binding protein-like [Arabidopsis thaliana] 7.0e-28
Blast2go: glycine-rich rna-binding 1.32014e-36
unknown
uagpf_v2_unigene13277 uagpf v2.0 898
AutoFact: U2 snrnp auxiliary factor, small subunit, putative n=2 Tax=rosids RepID=B9R8U8_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: splicing factor u2af 38 kda subunit 0.0
C-terminus
uagpf_v2_unigene13563 uagpf v2.0 645
AutoFact: Predicted protein n=2 Tax=Physcomitrella patens RepID=A9S3P5_PHYPA 6.0e-11
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
C-terminus
uagpf_v2_unigene13857 uagpf v2.0 659
AutoFact: Probable L-type lectin-domain containing receptor kinase S.5 n=2 Tax=Arabidopsis RepID=LRKS5_ARATH 0.0
Blast2go: probable l-type lectin-domain containing receptor kinase -like 0.0
unknown
uagpf_v2_unigene13879 uagpf v2.0 489
AutoFact: Copper ion binding protein, putative n=1 Tax=Ricinus communis RepID=B9S3E8_RICCO 2.0e-15
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: serine arginine repetitive matrix protein 1 0.0
N-terminus
uagpf_v2_unigene13881 uagpf v2.0 508
AutoFact: Os07g0631900 protein n=2 Tax=Oryza sativa RepID=Q8LHN4_ORYSJ 3.00018e-42
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: 33 kda chloroplastic-like 0.0
Putative N-terminus
uagpf_v2_unigene13918 uagpf v2.0 883
AutoFact: WD-repeat protein, putative n=1 Tax=Ricinus communis RepID=B9SRX4_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
Internal
uagpf_v2_unigene14025 uagpf v2.0 696
AutoFact: putative DNA binding protein [Trifolium pratense] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: rna-binding post-transcriptional regulator csx1-like 0.0
C-terminus
uagpf_v2_unigene14028 uagpf v2.0 1221
AutoFact: RNA recognition motif and CCHC-type zinc finger domain-containing protein [Arabidopsis thaliana] gb|AAL11606.1|AF424613_1 AT3g26420/F20C19_14 [Arabidopsis thaliana] dbj|BAB02203.1| unnamed protein product [Arabidopsis thaliana] gb|AAK96804.1| Unknown prot 7.0e-35
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: rna recognition motif family expressed 0.0
Putative C-terminus
uagpf_v2_unigene14107 uagpf v2.0 833
AutoFact: RNA recognition motif-containing protein [Arabidopsis thaliana] ref|NP_974317.1| RNA recognition motif-containing protein [Arabidopsis thaliana] dbj|BAA97064.1| unnamed protein product [Arabidopsis thaliana] gb|AAL36202.1| putative RNA-binding protein [Ar 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: rna recognition motif-containing protein 0.0
C-terminus
uagpf_v2_unigene14153 uagpf v2.0 1657
AutoFact: RNA-binding protein [Medicago truncatula] 5.0e-20
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
Complete
uagpf_v2_unigene14187 uagpf v2.0 441
AutoFact: transducin/WD40 domain-containing protein [Arabidopsis thaliana] dbj|BAB02018.1| WD40-repeat protein [Arabidopsis thaliana] gb|AAL32514.1| WD40-repeat protein [Arabidopsis thaliana] gb|AAM47943.1| WD40-repeat protein [Arabidopsis thaliana] gb|AEE76041.1| 0.0
FL-Next: tr=Transducin family protein; Arabidopsis lyrata subsp. lyrata (Lyre-leaved rock-cress). 0.0
Blast2go: 66 kda stress protein 0.0
C-terminus
uagpf_v2_unigene14260 uagpf v2.0 553
AutoFact: ASF/SF2-like pre-mRNA splicing factor SRP32' [Zea mays] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: arginine serine-rich splicing 0.0
N-terminus
uagpf_v2_unigene14345 uagpf v2.0 960
AutoFact: putative RNA-binding protein [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: heterogeneous nuclear ribonucleoprotein 0.0
Putative C-terminus
uagpf_v2_unigene14347 uagpf v2.0 691
AutoFact: putative RNA-binding protein RBP37 [Oryza sativa Japonica Group] dbj|BAG24017.1| RNA-binding protein [Oryza sativa Japonica Group] dbj|BAG95850.1| unnamed protein product [Oryza sativa Japonica Group] gb|EEE67936.1| hypothetical protein OsJ_25822 [Oryza s 0.0
Blast2go: rna-binding protein rbp37 0.0
unknown
uagpf_v2_unigene14416 uagpf v2.0 517
AutoFact: PREDICTED: HIV-1 Vpr binding protein, partial [Bos taurus] 0.0
Blast2go: protein 0.0
unknown
uagpf_v2_unigene14705 uagpf v2.0 619
AutoFact: DNA-damage-repair/toleration protein DRT111 [Arabidopsis thaliana] sp|P42698.2|DR111_ARATH RecName: Full=DNA-damage-repair/toleration protein DRT111, chloroplastic; Flags: Precursor gb|AAF19751.1|AC009917_10 Strong similarity to gi|1169200 DNA-Damage-Repa 0.0
FL-Next: sp=DNA-damage-repair/toleration protein DRT111, chloroplastic; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: dna-damage-repair toleration protein drt111 0.0
C-terminus
uagpf_v2_unigene14775 uagpf v2.0 485
AutoFact: RNA recognition motif-containing protein [Arabidopsis thaliana] gb|AAG30979.1|AC012396_15 RNA-binding glycine-rich protein, putative [Arabidopsis thaliana] gb|AAY17418.1| At1g73530 [Arabidopsis thaliana] gb|ABI49457.1| At1g73530 [Arabidopsis thaliana] gb| 1.0e-21
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: rna recognition motif-containing protein 0.0
N-terminus
uagpf_v2_unigene14786 uagpf v2.0 470
AutoFact: DNA polymerase delta catalytic subunit n=6 Tax=Poaceae RepID=DPOD1_ORYSJ 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: dna polymerase delta subunit 1 0.0
C-terminus
uagpf_v2_unigene14885 uagpf v2.0 477
AutoFact: Ser/Thr specific protein phosphatase 2A B regulatory subunit beta isoform n=3 Tax=rosids RepID=Q9FVD4_MEDSV 0.0
Blast2go: serine threonine protein phosphatase 2a 55 kda regulatory subunit b beta isoform-like 0.0
unknown

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain