Sustainpine_db
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Assembly Name: uagpf v2.0

Name: binding

Term: GO:0005488  Help

Source: GO from Blast2go

Ontology: Molecular Function

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
uagpf_v2_unigene9 uagpf v2.0 336
• AutoFact: PREDICTED: similar to SNF2 domain-containing protein / helicase domain-containing protein / RING finger domain-containing protein n=1 Tax=Vitis vinifera RepID=UPI0001983C0B 0.0
• FL-Next: sp=Putative SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 3-like 1; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Blast2go: helicase-like transcription factor-like protein 0.0
Putative N-terminus
uagpf_v2_unigene30 uagpf v2.0 739
• AutoFact: DNA-directed RNA polymerase subunit n=2 Tax=Papilionoideae RepID=Q2HU21_MEDTR 0.0
• FL-Next: sp=DNA-directed RNA polymerase subunit; Glycine max (Soybean) (Glycine hispida). 0.0
• Blast2go: dna-directed rna polymerase ii kda polypeptide 0.0
C-terminus
uagpf_v2_unigene49 uagpf v2.0 378
• AutoFact: Pentatricopeptide repeat-containing protein, putative n=1 Tax=Ricinus communis RepID=B9T2X9_RICCO 0.0
• FL-Next: sp=Pentatricopeptide repeat-containing protein At3g59040; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Blast2go: pentatricopeptide repeat-containing protein 0.0
Internal
uagpf_v2_unigene132 uagpf v2.0 490
• AutoFact: Unassigned protein
• Blast2go: zinc finger ccch domain-containing protein 53-like 0.0
unknown
uagpf_v2_unigene143 uagpf v2.0 1488
• AutoFact: Eukaryotic translation initiation factor 3 subunit G n=1 Tax=Picea sitchensis RepID=A9NNT0_PICSI 0.0
• FL-Next: sp=Eukaryotic translation initiation factor 3 subunit G; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: initiation factor 3g 0.0
Complete
uagpf_v2_unigene145 uagpf v2.0 245
• AutoFact: CCR4-NOT transcription complex subunit 9 [Arabidopsis thaliana] gb|AAM13902.1| putative cell differentiation protein [Arabidopsis thaliana] gb|AAM67486.1| putative cell differentiation protein [Arabidopsis thaliana] gb|AEE76424.1| CCR4-NOT transcription c 0.0
• Blast2go: protein 0.0
unknown
uagpf_v2_unigene231 uagpf v2.0 222
• AutoFact: Unassigned protein
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: biotinyl-lipoyl domain-containing protein 0.0
N-terminus
uagpf_v2_unigene313 uagpf v2.0 1992
• AutoFact: pre-mRNA-processing factor 39 [Arabidopsis thaliana] gb|AAL07170.1| unknown protein [Arabidopsis thaliana] gb|AAM14126.1| unknown protein [Arabidopsis thaliana] gb|AAM65430.1| unknown [Arabidopsis thaliana] gb|AEE27652.1| pre-mRNA-processing factor 39 [Ar 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: protein 0.0
C-terminus
uagpf_v2_unigene315 uagpf v2.0 654
• AutoFact: Unassigned protein
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: tetratricopeptide repeat domain-containing protein 2.8026e-45
C-terminus
uagpf_v2_unigene357 uagpf v2.0 368
• AutoFact: Desaturase delta 9 n=2 Tax=Picea RepID=Q8S4Q3_PICGL 0.0
• Blast2go: protein 0.0
unknown
uagpf_v2_unigene445 uagpf v2.0 807
• AutoFact: ATP citrate lyase, putative; 3734-7120 n=13 Tax=Magnoliophyta RepID=Q9C522_ARATH 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: atp-citrate synthase beta chain protein 1-like 0.0
Internal
uagpf_v2_unigene457 uagpf v2.0 1243
• AutoFact: 11-beta-hydroxysteroid dehydrogenase-like protein n=1 Tax=Pinus taeda RepID=Q0GJJ3_PINTA 0.0
• FL-Next: tr=11-beta-hydroxysteroid dehydrogenase-like protein; Pinus taeda (Loblolly pine). 0.0
• Blast2go: 11-beta-hydroxysteroid dehydrogenase-like 0.0
Complete
uagpf_v2_unigene828 uagpf v2.0 871
• AutoFact: ATP citrate lyase, putative; 3734-7120 n=13 Tax=Magnoliophyta RepID=Q9C522_ARATH 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: atp-citrate synthase beta chain protein 1-like 0.0
C-terminus
uagpf_v2_unigene842 uagpf v2.0 1147
• AutoFact: [J] COG5256 Translation elongation factor EF-1alpha (GTPase) 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: g1 to s phase transition protein 0.0
C-terminus
uagpf_v2_unigene894 uagpf v2.0 462
• AutoFact: Unassigned protein
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: plant u-box 17 0.0
C-terminus
uagpf_v2_unigene1091 uagpf v2.0 877
• AutoFact: E3 ubiquitin-protein ligase PUB22 [Arabidopsis thaliana] sp|Q9SVC6.1|PUB22_ARATH RecName: Full=E3 ubiquitin-protein ligase PUB22; AltName: Full=Plant U-box protein 22; AltName: Full=U-box domain-containing protein 22 emb|CAB43434.1| putative protein [Arab 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: e3 ubiquitin-protein ligase pub23-like 0.0
N-terminus
uagpf_v2_unigene1098 uagpf v2.0 505
• AutoFact: Unassigned protein
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: kinesin light chain-like protein 9.2378e-35
C-terminus
uagpf_v2_unigene1141 uagpf v2.0 428
• AutoFact: C-1-tetrahydrofolate synthase, cytoplasmic n=3 Tax=Andropogoneae RepID=B6SJR7_MAIZE 0.0
• Blast2go: protein 0.0
Coding
uagpf_v2_unigene1255 uagpf v2.0 1490
• AutoFact: Unassigned protein
• FL-Next: tr=Predicted protein; subsp. trichocarpa). 0.0
• Blast2go: dna binding 0.0
C-terminus
uagpf_v2_unigene1265 uagpf v2.0 569
• AutoFact: Replication factor C 40kDa subunit n=9 Tax=Poaceae RepID=Q948P2_ORYSJ 0.0
• Blast2go: replication factor subunit 2 0.0
unknown

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain