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Assembly Name: uagpf v2.0

Name: binding

Term: GO:0005488  Help

Source: GO from Blast2go

Ontology: Molecular Function


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
uagpf_v2_unigene5642 uagpf v2.0 2037
AutoFact: pfam01344, Kelch_1, Kelch motif 9.0e-07
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: kelch domain-containing protein 3-like 0.0
N-terminus
uagpf_v2_unigene5679 uagpf v2.0 666
AutoFact: RNA recognition motif-containing protein [Arabidopsis thaliana] gb|AED98140.1| RNA recognition motif-containing protein [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: heterogeneous nuclear 0.0
C-terminus
uagpf_v2_unigene5685 uagpf v2.0 834
AutoFact: protein helicase in vascular tissue and tapetum [Arabidopsis thaliana] gb|AEC08442.1| protein helicase in vascular tissue and tapetum [Arabidopsis thaliana] 8.0e-07
Blast2go: probable atp-dependent rna helicase ythdc2-like 1.96745e-10
Putative coding
uagpf_v2_unigene5699 uagpf v2.0 645
AutoFact: zinc ion binding protein [Arabidopsis thaliana] dbj|BAF00982.1| hypothetical protein [Arabidopsis thaliana] gb|ABM06032.1| At1g55915 [Arabidopsis thaliana] gb|AEE33319.1| zinc ion binding protein [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: zinc ion binding protein 0.0
C-terminus
uagpf_v2_unigene5780 uagpf v2.0 627
AutoFact: anaphase-promoting complex subunit 6 [Arabidopsis thaliana] sp|B3DNN5.1|CDC16_ARATH RecName: Full=Anaphase-promoting complex subunit 6; AltName: Full=Cell division cycle protein 16 homolog; Short=CDC16 homolog; AltName: Full=Cyclosome subunit 6; AltName: 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: cell division 0.0
C-terminus
uagpf_v2_unigene5815 uagpf v2.0 538
AutoFact: armadillo/beta-catenin-like repeat-containing protein [Arabidopsis thaliana] dbj|BAB09724.1| importin beta [Arabidopsis thaliana] gb|AED96362.1| armadillo/beta-catenin-like repeat-containing protein [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
Internal
uagpf_v2_unigene5816 uagpf v2.0 492
AutoFact: pfam11916, Vac14_Fig4_bd, Vacuolar protein 14 C-terminal Fig4p binding 0.0
FL-Next: tr=Putative uncharacterized protein; Ricinus communis (Castor bean). 0.0
Blast2go: protein vac14 homolog 0.0
Internal
uagpf_v2_unigene5831 uagpf v2.0 657
AutoFact: [R] COG0724 RNA-binding proteins (RRM domain) 4.0e-07
Blast2go: rna recognition motif-containing protein 0.0
unknown
uagpf_v2_unigene5849 uagpf v2.0 635
AutoFact: Ras-related protein Rab-18 n=4 Tax=Poaceae RepID=B6TCF9_MAIZE 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: ras-related protein rab-18 0.0
Putative Complete
uagpf_v2_unigene5859 uagpf v2.0 887
AutoFact: Glycerol kinase n=1 Tax=Pandanus amaryllifolius RepID=Q6RJ33_9LILI 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: glycerol kinase 0.0
N-terminus
uagpf_v2_unigene5907 uagpf v2.0 480
AutoFact: CLL4A clavata1-like receptor S/T protein kinase protein n=1 Tax=Physcomitrella patens subsp. patens RepID=A9SDH6_PHYPA 3.0e-19
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: extra sporogenous cells 0.0
Putative C-terminus
uagpf_v2_unigene5927 uagpf v2.0 378
AutoFact: RNA recognition motif (RRM)-containing protein [Arabidopsis thaliana] gb|AEE76829.1| RNA recognition motif (RRM)-containing protein [Arabidopsis thaliana] 1.0e-17
FL-Next: tr=Predicted protein; Physcomitrella patens subsp. patens (Moss). 0.0
Blast2go: rna recognition motif -containing protein 1.59963e-28
Internal
uagpf_v2_unigene5951 uagpf v2.0 445
AutoFact: prephenate dehydrogenase family protein [Arabidopsis thaliana] sp|Q9LMR3.1|TYRA2_ARATH RecName: Full=Arogenate dehydrogenase 2, chloroplastic; AltName: Full=TyrAAT2; Flags: Precursor gb|AAF82141.1|AC034256_5 Contains similarity to embryonic abundant prote 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: prephenate dehydrogenase family protein 0.0
N-terminus
uagpf_v2_unigene5971 uagpf v2.0 495
AutoFact: [TDBLU] COG5032 Phosphatidylinositol kinase and protein kinases of the PI-3 kinase family 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: transformation transcription domain-associated protein 0.0
C-terminus
uagpf_v2_unigene5998 uagpf v2.0 493
AutoFact: TIR/P-loop/LRR n=1 Tax=Pinus taeda RepID=Q8L8J0_PINTA 7.0e-27
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: tir p-loop lrr 5.9675e-36
Putative Complete
uagpf_v2_unigene6002 uagpf v2.0 758
AutoFact: splicing factor U2af small subunit A [Arabidopsis thaliana] sp|Q9S709.1|U2AFA_ARATH RecName: Full=Splicing factor U2af small subunit A; AltName: Full=U2 auxiliary factor 35 kDa subunit A; AltName: Full=U2 small nuclear ribonucleoprotein auxiliary factor s 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: u2 snrnp auxiliary small 0.0
C-terminus
uagpf_v2_unigene6016 uagpf v2.0 664
AutoFact: Myb_DNA-binding domain containing protein 9.0e-06
FL-Next: tr=Putative uncharacterized protein; Medicago truncatula (Barrel medic) (Medicago tribuloides). 0.0
Blast2go: dnaj homolog subfamily c member 2-like 0.0
C-terminus
uagpf_v2_unigene6054 uagpf v2.0 831
AutoFact: Serine/threonine-protein phosphatase 2A 65 kDa regulatory subunit A beta isoform n=23 Tax=Magnoliophyta RepID=2AAB_ARATH 0.0
FL-Next: sp=Serine/threonine-protein phosphatase 2A 65 kDa regulatory subunit A beta isoform; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: serine threonine protein phosphatase 2a regulatory subunit 0.0
C-terminus
uagpf_v2_unigene6058 uagpf v2.0 746
AutoFact: thylakoid ADP,ATP carrier protein [Arabidopsis thaliana] sp|Q9M024.1|TAAC_ARATH RecName: Full=Thylakoid ADP,ATP carrier protein, chloroplastic; AltName: Full=Thylakoid ADP/ATP translocase; Flags: Precursor emb|CAB82266.1| putative protein [Arabidopsis tha 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
C-terminus
uagpf_v2_unigene6069 uagpf v2.0 718
AutoFact: Beta-galactosidase n=1 Tax=Persea americana RepID=Q0EDB0_PERAE 0.0
FL-Next: sp=Beta-galactosidase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: beta galactosidase 9 0.0
C-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain