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Assembly Name: uagpf v2.0

Name: binding

Term: GO:0005488  Help

Source: GO from Blast2go

Ontology: Molecular Function


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
uagpf_v2_unigene4969 uagpf v2.0 469
AutoFact: NUC130/3NT and SDA1 domain-containing protein [Arabidopsis thaliana] dbj|BAE98871.1| hypothetical protein [Arabidopsis thaliana] gb|AEE28977.1| NUC130/3NT and SDA1 domain-containing protein [Arabidopsis thaliana] 1.0e-37
Blast2go: sda1 family protein 0.0
unknown
uagpf_v2_unigene5005 uagpf v2.0 769
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein kiaa0415-like 0.0
C-terminus
uagpf_v2_unigene5008 uagpf v2.0 881
AutoFact: putative riboflavin synthase alpha chain [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Selaginella moellendorffii (Spikemoss). 0.0
Blast2go: riboflavin synthase alpha chain 0.0
C-terminus
uagpf_v2_unigene5041 uagpf v2.0 1461
AutoFact: SAP DNA-binding domain-containing protein n=1 Tax=Dictyostelium discoideum RepID=Q54WI5_DICDI 3.0e-38
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: ribonucleoprotein ptb-binding 1-like 0.0
N-terminus
uagpf_v2_unigene5044 uagpf v2.0 1200
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: protein kiaa0415-like 0.0
N-terminus
uagpf_v2_unigene5066 uagpf v2.0 496
AutoFact: alpha-mannosidase [Arabidopsis thaliana] emb|CAA66821.1| alpha-mannosidase [Arabidopsis thaliana] emb|CAA72432.1| alpha-mannosidase precursor [Arabidopsis thaliana] dbj|BAB01735.1| alpha-mannosidase [Arabidopsis thaliana] gb|AAK62592.1| AT3g26720/MLJ15_12 0.0
FL-Next: tr=Predicted protein; Physcomitrella patens subsp. patens (Moss). 0.0
Blast2go: protein 0.0
N-terminus
uagpf_v2_unigene5196 uagpf v2.0 683
AutoFact: [R] COG0790 FOG: TPR repeat, SEL1 subfamily 3.0e-25
FL-Next: tr=Putative uncharacterized protein; Ricinus communis (Castor bean). 0.0
Blast2go: protein 0.0
C-terminus
uagpf_v2_unigene5206 uagpf v2.0 391
AutoFact: 26S proteasome non-ATPase regulatory subunit 5 [Arabidopsis thaliana] gb|AAP21298.1| At3g15180 [Arabidopsis thaliana] dbj|BAE99435.1| hypothetical protein [Arabidopsis thaliana] gb|AEE75628.1| 26S proteasome non-ATPase regulatory subunit 5 [Arabidopsis th 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: 26s proteasome non-atpase regulatory subunit 5 0.0
C-terminus
uagpf_v2_unigene5276 uagpf v2.0 960
AutoFact: armadillo/beta-catenin-like repeat-containing protein [Arabidopsis thaliana] dbj|BAB09724.1| importin beta [Arabidopsis thaliana] gb|AED96362.1| armadillo/beta-catenin-like repeat-containing protein [Arabidopsis thaliana] 0.0
Blast2go: protein 0.0
unknown
uagpf_v2_unigene5294 uagpf v2.0 596
AutoFact: putative DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 8 (RNA helicase) [Oryza sativa Japonica Group] 9.99995e-41
FL-Next: sp=Putative uncharacterized protein At4g01020, chloroplastic; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: uncharacterized protein chloroplastic-like 0.0
Internal
uagpf_v2_unigene5366 uagpf v2.0 1233
AutoFact: TPR repeat-containing thioredoxin TTL1 [Arabidopsis thaliana] sp|Q9MAH1.1|TTL1_ARATH RecName: Full=TPR repeat-containing thioredoxin TTL1; AltName: Full=Tetratricopeptide repeat thioredoxin-like 1 gb|AAF69536.1|AC008007_11 F12M16.20 [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
C-terminus
uagpf_v2_unigene5389 uagpf v2.0 836
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: nucleic acid binding 0.0
N-terminus
uagpf_v2_unigene5391 uagpf v2.0 544
AutoFact: Eukaryotic translation initiation factor 3 subunit, putative n=1 Tax=Ricinus communis RepID=B9RHH9_RICCO 0.0
Blast2go: tetratricopeptide repeat -containing protein 0.0
unknown
uagpf_v2_unigene5393 uagpf v2.0 627
AutoFact: RecName: Full=Mitochondrial import receptor subunit TOM20; AltName: Full=Translocase of outer membrane 20 kDa subunit emb|CAA63223.1| TOM20 [Solanum tuberosum] 4.06377e-44
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: mitochondrial import receptor subunit tom20 0.0
C-terminus
uagpf_v2_unigene5415 uagpf v2.0 1159
AutoFact: pfam00385, Chromo, Chromodomain 1.0e-13
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: terminal flower 2 protein 0.0
Putative Complete
uagpf_v2_unigene5459 uagpf v2.0 745
AutoFact: Predicted protein n=3 Tax=Physcomitrella patens subsp. patens RepID=A9SMX6_PHYPA 0.0
FL-Next: sp=Pumilio homolog 1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: protein 0.0
Internal
uagpf_v2_unigene5590 uagpf v2.0 778
AutoFact: Mitochondrial carrier protein, putative n=1 Tax=Ricinus communis RepID=B9SW87_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: mitochondrial carrier 0.0
C-terminus
uagpf_v2_unigene5620 uagpf v2.0 693
AutoFact: Calmodulin-like n=3 Tax=Oryza sativa RepID=Q5Z905_ORYSJ 3.0e-17
FL-Next: tr=Calmodulin-like; Oryza sativa subsp. japonica (Rice). 0.0
Blast2go: p30 dbc 8.81767e-19
C-terminus
uagpf_v2_unigene5622 uagpf v2.0 522
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: nucleic acid binding 0.0
Complete
uagpf_v2_unigene5635 uagpf v2.0 939
AutoFact: dioxygenase-like protein [Arabidopsis thaliana] dbj|BAB11066.1| unnamed protein product [Arabidopsis thaliana] gb|AAM65524.1| unknown [Arabidopsis thaliana] gb|AAP37672.1| At5g48020 [Arabidopsis thaliana] dbj|BAE99693.1| hypothetical protein [Arabidopsis 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
C-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain