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Assembly Name: uagpf v2.0

Name: binding

Term: GO:0005488  Help

Source: GO from Blast2go

Ontology: Molecular Function


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
uagpf_v2_unigene2332 uagpf v2.0 423
AutoFact: Short-chain dehydrogenase/reductase family protein n=2 Tax=Arabidopsis RepID=D7LXC9_ARALL 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: rossmann-fold nad -binding domain-containing protein 0.0
C-terminus
uagpf_v2_unigene2436 uagpf v2.0 577
AutoFact: SOUL heme-binding protein [Arabidopsis thaliana] gb|AAD50021.1|AC007651_16 Similar to SOUL Protein [Arabidopsis thaliana] gb|AAM64525.1| SOUL-like protein [Arabidopsis thaliana] gb|ABD43013.1| At1g17100 [Arabidopsis thaliana] gb|AEE29541.1| SOUL heme-bind 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: heme-binding protein 2-like 0.0
C-terminus
uagpf_v2_unigene2451 uagpf v2.0 558
AutoFact: Methionine-tRNA synthetase, putative n=1 Tax=Ricinus communis RepID=B9RWD7_RICCO 4.0e-34
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: methionyl-trna synthetase 3.49475e-39
Internal
uagpf_v2_unigene2458 uagpf v2.0 459
AutoFact: WS0281.B21_D08 SS-IB-A-FL-13 Picea sitchensis cDNA clone WS0281_D08 5, mRNA sequence. 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: transcription factor tt8 0.0
Putative N-terminus
uagpf_v2_unigene2478 uagpf v2.0 441
AutoFact: COG0702: Predicted nucleoside-diphosphate-sugar epimerases (ISS) [Ostreococcus tauri] emb|CAL51450.1| COG0702: Predicted nucleoside-diphosphate-sugar epimerases (ISS) [Ostreococcus tauri] 6.0e-31
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: nad-dependent epimerase dehydratase 0.0
Internal
uagpf_v2_unigene2553 uagpf v2.0 883
AutoFact: putative 5-3 exoribonuclease [Oryza sativa Japonica Group] 0.0
FL-Next: sp=5'-3' exoribonuclease 3; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: 5 -3 exoribonuclease 3-like 0.0
N-terminus
uagpf_v2_unigene2583 uagpf v2.0 414
AutoFact: Unassigned protein
Blast2go: dna binding 0.0
unknown
uagpf_v2_unigene2591 uagpf v2.0 1033
AutoFact: F/Y-rich N-terminus family protein [Trichomonas vaginalis G3] gb|EAY14498.1| F/Y-rich N-terminus family protein [Trichomonas vaginalis G3] 7.0e-31
Blast2go: protein 0.0
Coding
uagpf_v2_unigene2614 uagpf v2.0 468
AutoFact: Protein binding protein, putative n=1 Tax=Ricinus communis RepID=B9SVA9_RICCO 8.0e-10
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein binding 3.85551e-10
Putative N-terminus
uagpf_v2_unigene2654 uagpf v2.0 771
AutoFact: RNA helicase n=1 Tax=Vigna radiata var. radiata RepID=Q9M6R6_VIGRR 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: dead-box atp-dependent rna helicase 7-like 0.0
Internal
uagpf_v2_unigene2728 uagpf v2.0 1123
AutoFact: 6-phosphogluconate dehydrogenase NAD-binding domain-containing protein [Musa acuminata] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
N-terminus
uagpf_v2_unigene2730 uagpf v2.0 688
AutoFact: putative DEAD-box protein abstrakt [Trifolium pratense] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: dead-box protein abstrakt 0.0
C-terminus
uagpf_v2_unigene2745 uagpf v2.0 494
AutoFact: SIT4 phosphatase-associated family protein [Arabidopsis thaliana] gb|AAM83251.1| At1g07990/T6D22_5 [Arabidopsis thaliana] gb|AAO42781.1| At1g07990/T6D22_5 [Arabidopsis thaliana] gb|AEE28224.1| SIT4 phosphatase-associated family protein [Arabidopsis thalia 0.0
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: serine threonine-protein phosphatase 6 regulatory subunit 3-like 0.0
Internal
uagpf_v2_unigene2886 uagpf v2.0 857
AutoFact: CDC48-interacting UBX-domain protein n=3 Tax=Arabidopsis RepID=Q9ZU93_ARATH 0.0
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: ubx domain-containing protein 6-like 0.0
Internal
uagpf_v2_unigene2888 uagpf v2.0 1792
AutoFact: DEAD box RNA helicase [Pisum sativum] gb|AAR97917.1| DEAD box RNA helicase [Pisum sativum] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
Complete
uagpf_v2_unigene2916 uagpf v2.0 885
AutoFact: Protein predicted to be involved in carbohydrate metabolism (ISS) [Ostreococcus tauri] emb|CAL57637.1| Protein predicted to be involved in carbohydrate metabolism (ISS) [Ostreococcus tauri] 0.0
Blast2go: protein 0.0
unknown
uagpf_v2_unigene2958 uagpf v2.0 575
AutoFact: [J] COG5256 Translation elongation factor EF-1alpha (GTPase) 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: g1 to s phase transition protein 0.0
Internal
uagpf_v2_unigene2988 uagpf v2.0 527
AutoFact: Theobromine synthase n=7 Tax=Camellia RepID=B6ZH68_9ERIC 4.0e-19
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: s-adenosyl-l-methionine salicylic acid carboxyl methyltransferase-like protein 0.0
Internal
uagpf_v2_unigene2989 uagpf v2.0 612
AutoFact: pfam05691, Raffinose_syn, Raffinose synthase or seed inhibition protein Sip1 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: raffinose synthase-like protein 0.0
C-terminus
uagpf_v2_unigene3122 uagpf v2.0 556
AutoFact: Ank_2 multi-domain protein 2.0e-13
FL-Next: tr=Putative uncharacterized protein; Glycine max (Soybean) (Glycine hispida). 0.0
Blast2go: ankyrin repeat and regulator of chromosome condensation domain-containing protein 0.0
C-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain