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Assembly Name: uagpf v2.0

Name: binding

Term: GO:0005488  Help

Source: GO from Blast2go

Ontology: Molecular Function


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
uagpf_v2_unigene1839 uagpf v2.0 410
AutoFact: DUF819 domain containing protein 0.0
Blast2go: protein 0.0
unknown
uagpf_v2_unigene1857 uagpf v2.0 327
AutoFact: Mitochondrial substrate carrier family protein n=3 Tax=Arabidopsis RepID=Q949U9_ARATH 0.0
Blast2go: mitochondrial carrier protein 0.0
unknown
uagpf_v2_unigene1874 uagpf v2.0 593
AutoFact: Unassigned protein
Blast2go: zinc finger ccch domain-containing protein 53-like 0.0
Coding
uagpf_v2_unigene1902 uagpf v2.0 650
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein xri1 1.20203e-35
C-terminus
uagpf_v2_unigene1931 uagpf v2.0 433
AutoFact: tetratricopeptide repeat domain-containing protein [Arabidopsis thaliana] gb|AAC98059.1| chloroplast lumen common protein family [Arabidopsis thaliana] gb|ABI49479.1| At2g37400 [Arabidopsis thaliana] gb|AEC09393.1| tetratricopeptide repeat domain-containi 1.0e-32
Blast2go: protein 0.0
unknown
uagpf_v2_unigene1947 uagpf v2.0 553
AutoFact: Myosin_tail_1 multi-domain protein 3.0e-06
Blast2go: cgs1 mrna stability 0.0
unknown
uagpf_v2_unigene1957 uagpf v2.0 719
AutoFact: Translational repressor Pumilio/PUF3 and related RNA-binding proteins (Puf superfamily) (ISS) [Ostreococcus tauri] emb|CAL57619.1| Translational repressor Pumilio/PUF3 and related RNA-binding proteins (Puf superfamily) (ISS) [Ostreococcus tauri] 1.99965e-42
Blast2go: protein 0.0
Putative coding
uagpf_v2_unigene2001 uagpf v2.0 368
AutoFact: putative splicing factor U2AF large chain [Arabidopsis thaliana] 2.0e-25
Blast2go: rna recognition motif-containing protein 0.0
unknown
uagpf_v2_unigene2011 uagpf v2.0 610
AutoFact: Short-chain type dehydrogenase/reductase n=1 Tax=Picea abies RepID=SDR1_PICAB 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: short-chain type 0.0
C-terminus
uagpf_v2_unigene2035 uagpf v2.0 968
AutoFact: Mitochondrial substrate carrier family protein [Arabidopsis thaliana] dbj|BAA97309.1| mitochondrial carrier protein-like [Arabidopsis thaliana] gb|AAP40437.1| putative mitochondrial carrier protein [Arabidopsis thaliana] gb|AAU90078.1| At5g64970 [Arabidop 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: mitochondrial substrate carrier family protein 0.0
C-terminus
uagpf_v2_unigene2090 uagpf v2.0 873
AutoFact: Arginyl-tRNA--protein transferase 1 n=1 Tax=Ricinus communis RepID=B9SLM9_RICCO 0.0
FL-Next: sp=Arginyl-tRNA--protein transferase 1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: arginyl-trna--protein transferase 1-like 0.0
Putative C-terminus
uagpf_v2_unigene2109 uagpf v2.0 218
AutoFact: Short-chain type dehydrogenase/reductase n=1 Tax=Picea abies RepID=SDR1_PICAB 0.0
Blast2go: short-chain dehydrogenase reductase family protein 0.0
unknown
uagpf_v2_unigene2126 uagpf v2.0 585
AutoFact: F-box protein [Arabidopsis thaliana] sp|Q94C27.1|FB84_ARATH RecName: Full=F-box protein At1g70590 gb|AAK59789.1| At1g70590/F5A18_23 [Arabidopsis thaliana] gb|AAO11593.1| At1g70590/F5A18_23 [Arabidopsis thaliana] gb|AEE35086.1| F-box protein [Arabidopsis t 0.0
Blast2go: f-box protein 0.0
unknown
uagpf_v2_unigene2146 uagpf v2.0 457
AutoFact: F-box protein [Arabidopsis thaliana] sp|Q94C27.1|FB84_ARATH RecName: Full=F-box protein At1g70590 gb|AAK59789.1| At1g70590/F5A18_23 [Arabidopsis thaliana] gb|AAO11593.1| At1g70590/F5A18_23 [Arabidopsis thaliana] gb|AEE35086.1| F-box protein [Arabidopsis t 0.0
FL-Next: tr=Predicted protein; subsp. trichocarpa). 0.0
Blast2go: f-box protein 0.0
C-terminus
uagpf_v2_unigene2158 uagpf v2.0 672
AutoFact: cytokinin trans-hydroxylase [Arabidopsis thaliana] dbj|BAB09357.1| cytochrome P450-like protein [Arabidopsis thaliana] gb|AED94318.1| cytokinin trans-hydroxylase [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: cytokinin trans-hydroxylase 0.0
N-terminus
uagpf_v2_unigene2198 uagpf v2.0 963
AutoFact: DUF1421 multi-domain protein 3.0e-06
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: uncharacterized protein at2g02148-like 0.0
C-terminus
uagpf_v2_unigene2212 uagpf v2.0 784
AutoFact: zf-UBP domain containing protein 7.0e-05
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: dead-box atp-dependent rna helicase 0.0
C-terminus
uagpf_v2_unigene2241 uagpf v2.0 1109
AutoFact: Unassigned protein
FL-Next: tr=Predicted protein; subsp. trichocarpa). 0.0
Blast2go: protein 1.73859e-15
N-terminus
uagpf_v2_unigene2254 uagpf v2.0 535
AutoFact: Rossmann-fold NAD(P)-binding domain-containing protein [Arabidopsis thaliana] dbj|BAB08749.1| carbonyl reductase-like protein [Arabidopsis thaliana] gb|AAV74232.1| At5g51030 [Arabidopsis thaliana] gb|AAW39010.1| At5g51030 [Arabidopsis thaliana] gb|AED9602 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: short-chain dehydrogenase reductase family protein 0.0
N-terminus
uagpf_v2_unigene2286 uagpf v2.0 727
AutoFact: putative ubiquitin-protein ligase 1 [Oryza sativa Japonica Group] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: ubiquitin-protein ligase 1 0.0
C-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain