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Assembly Name: uagpf v2.0

Name: binding

Term: GO:0005488  Help

Source: GO from Blast2go

Ontology: Molecular Function

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
uagpf_v2_unigene1293 uagpf v2.0 998
• AutoFact: Rossmann-fold NAD(P)-binding domain-containing protein [Arabidopsis thaliana] gb|AAM83244.1| AT3g03330/T21P5_25 [Arabidopsis thaliana] gb|AAN18119.1| At3g03330/T21P5_25 [Arabidopsis thaliana] gb|AEE73930.1| Rossmann-fold NAD(P)-binding domain-containing p 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: at3g03330 t21p5_25 0.0
C-terminus
uagpf_v2_unigene1324 uagpf v2.0 469
• AutoFact: pentatricopeptide repeat-containing protein [Arabidopsis thaliana] sp|Q9LZP3.1|PP293_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g62470, mitochondrial; Flags: Precursor emb|CAB82961.1| putative protein [Arabidopsis thaliana] gb|AAQ6 0.0
• Blast2go: pentatricopeptide repeat-containing protein 0.0
unknown
uagpf_v2_unigene1349 uagpf v2.0 423
• AutoFact: Rossmann-fold NAD(P)-binding domain-containing protein [Arabidopsis thaliana] gb|AAL38267.1| unknown protein [Arabidopsis thaliana] gb|AAM47876.1| unknown protein [Arabidopsis thaliana] gb|AEC09632.1| Rossmann-fold NAD(P)-binding domain-containing protein 0.0
• Blast2go: rossmann-fold nad -binding domain-containing protein 0.0
unknown
uagpf_v2_unigene1448 uagpf v2.0 1777
• AutoFact: Pentatricopeptide repeat-containing protein n=1 Tax=Cucumis melo subsp. melo RepID=E5GB98_CUCME 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: pentatricopeptide repeat-containing protein 0.0
Putative Complete
uagpf_v2_unigene1544 uagpf v2.0 347
• AutoFact: Mito_carr domain containing protein 9.0e-26
• Blast2go: protein brittle- chloroplastic amyloplastic-like 0.0
unknown
uagpf_v2_unigene1586 uagpf v2.0 1022
• AutoFact: putative peroxisomal Ca-dependent solute carrier protein [Oryza sativa Japonica Group] gb|AAP06894.1| hypothetical protein [Oryza sativa Japonica Group] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: protein 0.0
Putative C-terminus
uagpf_v2_unigene1603 uagpf v2.0 660
• AutoFact: Os08g0451800 protein n=1 Tax=Oryza sativa Japonica Group RepID=Q0J5A1_ORYSJ 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: probable e3 ubiquitin-protein ligase rnf144a-like 0.0
C-terminus
uagpf_v2_unigene1622 uagpf v2.0 489
• AutoFact: cyclic nucleotide gated channel [Arabidopsis thaliana] sp|Q9SJA4.2|CNG14_ARATH RecName: Full=Probable cyclic nucleotide-gated ion channel 14; AltName: Full=Cyclic nucleotide- and calmodulin-regulated ion channel 14 dbj|BAF00079.1| putative cyclic nucleoti 0.0
• Blast2go: cyclic nucleotide-gated ion 0.0
Putative coding
uagpf_v2_unigene1625 uagpf v2.0 1029
• AutoFact: PUB26; PUB26 (PLANT U-BOX 26); binding / ubiquitin-protein ligase 4.0e-30
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: protein 0.0
C-terminus
uagpf_v2_unigene1657 uagpf v2.0 432
• AutoFact: Unassigned protein
• FL-Next: tr=Predicted protein; subsp. trichocarpa). 0.0
• Blast2go: armadillo beta-catenin-like repeat-containing protein 0.0
C-terminus
uagpf_v2_unigene1680 uagpf v2.0 485
• AutoFact: Zinc finger, CCCH-type n=1 Tax=Medicago truncatula RepID=A2Q3L5_MEDTR 0.0
• Blast2go: nucleic acid binding 0.0
unknown
uagpf_v2_unigene1682 uagpf v2.0 457
• AutoFact: Rossmann-fold NAD(P)-binding domain-containing protein [Arabidopsis thaliana] dbj|BAC41977.1| unknown protein [Arabidopsis thaliana] gb|AAP37706.1| At4g31530 [Arabidopsis thaliana] gb|AEE85924.1| Rossmann-fold NAD(P)-binding domain-containing protein [Ara 0.0
• FL-Next: tr=Putative uncharacterized protein Sb01g035100; Sorghum bicolor (Sorghum) (Sorghum vulgare). 0.0
• Blast2go: rossmann-fold nad -binding domain-containing protein 0.0
C-terminus
uagpf_v2_unigene1694 uagpf v2.0 941
• AutoFact: HAT family dimerisation domain containing protein n=2 Tax=Oryza sativa RepID=Q2R1C3_ORYSJ 0.0
• FL-Next: tr=Putative uncharacterized protein Sb03g034920; Sorghum bicolor (Sorghum) (Sorghum vulgare). 0.0
• Blast2go: hat dimerisation domain-containing 0.0
Internal
uagpf_v2_unigene1700 uagpf v2.0 528
• AutoFact: Protein MOS2 n=2 Tax=Arabidopsis RepID=MOS2_ARATH 1.0e-11
• FL-Next: sp=Protein MOS2; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Blast2go: protein mos2 1.01848e-12
Internal
uagpf_v2_unigene1738 uagpf v2.0 711
• AutoFact: putative heterogeneous nuclear ribonucleoprotein [Vitis vinifera] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: protein 0.0
Putative N-terminus
uagpf_v2_unigene1740 uagpf v2.0 440
• AutoFact: Unassigned protein
• Blast2go: uncharacterized protein partial 2.26038e-15
Putative coding
uagpf_v2_unigene1752 uagpf v2.0 721
• AutoFact: putative COP9 signalosome complex subunit 2 [Oryza sativa Japonica Group] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: cop9 signalosome complex subunit 2-like 0.0
C-terminus
uagpf_v2_unigene1791 uagpf v2.0 317
• AutoFact: Short chain alcohol dehydrogenase, putative n=2 Tax=Ricinus communis RepID=B9SLP2_RICCO 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: momilactone a synthase-like 0.0
N-terminus
uagpf_v2_unigene1828 uagpf v2.0 472
• AutoFact: Unassigned protein
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: pentatricopeptide repeat-containing protein 0.0
C-terminus
uagpf_v2_unigene1836 uagpf v2.0 213
• AutoFact: pentatricopeptide repeat-containing protein [Arabidopsis thaliana] sp|Q9LVD3.2|PP434_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g57250, mitochondrial; Flags: Precursor gb|AED96871.1| pentatricopeptide repeat-containing protein [Ara 2.0e-10
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: pentatricopeptide repeat-containing protein mitochondrial-like 3.88855e-14
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain