Sustainpine_db
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Assembly Name: uagpf v2.0

Name: regulation of transcription, DNA-dependent

Term: GO:0006355  Help

Source: GO from Blast2go

Ontology: Biological Process

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
uagpf_v2_unigene9512 uagpf v2.0 395
• AutoFact: sensory transduction histidine kinase [Rhodopirellula baltica SH 1] emb|CAD71417.1| sensory transduction histidine kinase [Rhodopirellula baltica SH 1] 3.0e-21
• Blast2go: sensory transduction histidine kinase 0.0
Putative coding
uagpf_v2_unigene9687 uagpf v2.0 738
• AutoFact: Chitin-inducible gibberellin-responsive protein, putative n=1 Tax=Ricinus communis RepID=B9S2N0_RICCO 0.0
• FL-Next: tr=SCARECROW; Pinus sylvestris (Scots pine). 0.0
• Blast2go: scarecrow-like protein 1-like 0.0
Internal
uagpf_v2_unigene9749 uagpf v2.0 333
• AutoFact: U5 small nuclear ribonucleoprotein helicase [Arabidopsis thaliana] dbj|BAB10376.1| RNA helicase [Arabidopsis thaliana] gb|AED97426.1| U5 small nuclear ribonucleoprotein helicase [Arabidopsis thaliana] 0.0
• FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
• Blast2go: activating signal cointegrator 1 complex subunit 0.0
Internal
uagpf_v2_unigene9901 uagpf v2.0 505
• AutoFact: Protein phosphatase 2a, regulatory subunit, putative n=1 Tax=Ricinus communis RepID=B9SH46_RICCO 0.0
• FL-Next: sp=Serine/threonine protein phosphatase 2A 57 kDa regulatory subunit B' beta isoform; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Blast2go: protein 0.0
C-terminus
uagpf_v2_unigene10052 uagpf v2.0 774
• AutoFact: Homeobox transcription factor SKN2 n=3 Tax=Pinaceae RepID=Q9ZR90_PICMA 0.0
• FL-Next: tr=Homeobox transcription factor KN2; Pinus taeda (Loblolly pine). 0.0
• Blast2go: homeobox transcription factor kn2 0.0
N-terminus
uagpf_v2_unigene10054 uagpf v2.0 304
• AutoFact: FACT complex subunit n=1 Tax=Physcomitrella patens subsp. patens RepID=A9TYN6_PHYPA 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: fact complex subunit 0.0
Internal
uagpf_v2_unigene10094 uagpf v2.0 309
• AutoFact: Shwachman-Bodian-Diamond syndrome protein, putative n=1 Tax=Ricinus communis RepID=B9S2M8_RICCO 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: protein 0.0
Internal
uagpf_v2_unigene10105 uagpf v2.0 570
• AutoFact: CCR4-NOT transcription complex subunit 2 [Arabidopsis thaliana] gb|AEE28167.1| CCR4-NOT transcription complex subunit 2 [Arabidopsis thaliana] 1.0e-31
• FL-Next: sp=Probable NOT transcription complex subunit VIP2; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Blast2go: probable not transcription complex subunit vip2-like 2.43342e-39
Internal
uagpf_v2_unigene10300 uagpf v2.0 400
• AutoFact: pfam03638, CXC, Tesmin/TSO1-like CXC domain 1.0e-20
• Blast2go: cysteine-rich polycomb-like protein 0.0
Coding
uagpf_v2_unigene10484 uagpf v2.0 910
• AutoFact: Transcription factor, putative n=1 Tax=Ricinus communis RepID=B9RHR8_RICCO 0.0
• Blast2go: enhancer of polycomb-like protein 0.0
unknown
uagpf_v2_unigene10526 uagpf v2.0 498
• AutoFact: Histone acetyltransferase n=5 Tax=rosids RepID=B9H794_POPTR 0.0
• Blast2go: histone acetyltransferase 0.0
unknown
uagpf_v2_unigene10548 uagpf v2.0 318
• AutoFact: Heat shock factor protein HSF8, putative n=1 Tax=Ricinus communis RepID=B9SNT1_RICCO 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: heat shock factor 0.0
Internal
uagpf_v2_unigene10565 uagpf v2.0 599
• AutoFact: ZEITLUPE n=1 Tax=Mesembryanthemum crystallinum RepID=Q6UEI5_MESCR 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: adagio protein 1 0.0
Putative N-terminus
uagpf_v2_unigene10570 uagpf v2.0 824
• AutoFact: AP2 domain-containing transcription factor 7 n=1 Tax=Glycine max RepID=C9WA65_SOYBN 2.0e-31
• Blast2go: dehydration responsive element binding protein 7.17662e-34
unknown
uagpf_v2_unigene10929 uagpf v2.0 868
• AutoFact: Putative auxin response factor 6/8 n=1 Tax=Ephedra distachya RepID=E1UHX6_EPHDI 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: arf6 0.0
C-terminus
uagpf_v2_unigene11100 uagpf v2.0 398
• AutoFact: Protein phosphatase 2a, regulatory subunit, putative n=1 Tax=Ricinus communis RepID=B9SH46_RICCO 0.0
• FL-Next: sp=Serine/threonine protein phosphatase 2A 59 kDa regulatory subunit B' gamma isoform; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Blast2go: protein 0.0
Internal
uagpf_v2_unigene11107 uagpf v2.0 790
• AutoFact: response regulator 8 [Zea mays] dbj|BAB41137.1| response regulator 8 [Zea mays] gb|ACG47663.1| two-component response regulator ARR1 [Zea mays] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: type-b response regulator 0.0
N-terminus
uagpf_v2_unigene11116 uagpf v2.0 412
• AutoFact: WRKY transcription factor 1 (Fragment) n=1 Tax=Picea abies RepID=B2KZJ7_PICAB 2.00386e-43
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: wrky transcription factor 6 0.0
Internal
uagpf_v2_unigene11173 uagpf v2.0 814
• AutoFact: Ethylene receptor ETR1 n=2 Tax=core eudicotyledons RepID=B3FIA9_ACTDE 0.0
• FL-Next: sp=Ethylene receptor 1; Solanum lycopersicum (Tomato) (Lycopersicon esculentum). 0.0
• Blast2go: ethylene receptor 0.0
C-terminus
uagpf_v2_unigene11316 uagpf v2.0 660
• AutoFact: DNA binding protein, putative n=1 Tax=Ricinus communis RepID=B9SH81_RICCO 2.0e-20
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: dna binding 8.65302e-42
C-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain