Sustainpine_db
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Assembly Name: uagpf v2.0

Name: regulation of transcription, DNA-dependent

Term: GO:0006355  Help

Source: GO from Blast2go

Ontology: Biological Process


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
uagpf_v2_unigene5264 uagpf v2.0 437
AutoFact: [B] COG5602 Histone deacetylase complex, SIN3 component 9.0e-34
Blast2go: paired amphipathic helix protein sin3-like 4-like 0.0
unknown
uagpf_v2_unigene5278 uagpf v2.0 706
AutoFact: RecName: Full=FACT complex subunit SSRP1; AltName: Full=Facilitates chromatin transcription complex subunit SSRP1; AltName: Full=Recombination signal sequence recognition protein 1 emb|CAA66480.1| transcription factor [Vicia faba var. minor] 3.0e-30
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: fact complex subunit ssrp1 1.27339e-34
Internal
uagpf_v2_unigene5332 uagpf v2.0 371
AutoFact: putative helicase [Arabidopsis thaliana] 0.0
Blast2go: dna helicase ino80-like 0.0
unknown
uagpf_v2_unigene5434 uagpf v2.0 535
AutoFact: GAGA-binding transcriptional activator BBR/BPC6-like n=1 Tax=Vitis vinifera RepID=B2Z458_VITVI 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: basic pentacysteine 4 0.0
N-terminus
uagpf_v2_unigene5446 uagpf v2.0 395
AutoFact: Transcription factor, putative n=1 Tax=Ricinus communis RepID=B9SQC7_RICCO 2.0e-19
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 1.45455e-42
C-terminus
uagpf_v2_unigene5464 uagpf v2.0 565
AutoFact: Transcription factor, putative n=1 Tax=Ricinus communis RepID=B9RMJ9_RICCO 0.0
Blast2go: dna-binding protein 0.0
Coding
uagpf_v2_unigene5561 uagpf v2.0 956
AutoFact: nuclear factor Y, subunit C11 [Arabidopsis thaliana] gb|AAL58929.1|AF462841_1 At3g12480/MQC3.32 [Arabidopsis thaliana] dbj|BAB03155.1| unnamed protein product [Arabidopsis thaliana] gb|AAN28786.1| At3g12480/MQC3.32 [Arabidopsis thaliana] gb|AEE75200.1| nu 4.00001e-41
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
N-terminus
uagpf_v2_unigene5577 uagpf v2.0 910
AutoFact: Response regulator 1 n=1 Tax=Pinus pinea RepID=C0LLL0_PINPI 0.0
FL-Next: tr=Response regulator 1; Pinus pinea (Italian stone pine). 0.0
Blast2go: type-a response regulator 0.0
Complete
uagpf_v2_unigene5585 uagpf v2.0 720
AutoFact: Histone acetyltransferase n=1 Tax=Physcomitrella patens subsp. patens RepID=A9RJM4_PHYPA 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: histone acetyltransferase 0.0
C-terminus
uagpf_v2_unigene5608 uagpf v2.0 687
AutoFact: Homeobox transcription factor SKN2 n=3 Tax=Pinaceae RepID=Q9ZR90_PICMA 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: homeobox transcription factor kn2 0.0
C-terminus
uagpf_v2_unigene5708 uagpf v2.0 894
AutoFact: Chitin-inducible gibberellin-responsive protein, putative n=1 Tax=Ricinus communis RepID=B9S6I2_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: scarecrow-like protein 4-like 0.0
C-terminus
uagpf_v2_unigene5717 uagpf v2.0 509
AutoFact: sensory transduction histidine kinase [Rhodopirellula baltica SH 1] emb|CAD71417.1| sensory transduction histidine kinase [Rhodopirellula baltica SH 1] 3.0e-21
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: sensory transduction histidine kinase 0.0
C-terminus
uagpf_v2_unigene5845 uagpf v2.0 697
AutoFact: ATP-binding cassette transporter, subfamily I, member 15, ABC component protein PpABCI15 (Fragment) n=2 Tax=Physcomitrella patens subsp. patens RepID=A9RAW0_PHYPA 0.0
FL-Next: sp=UPF0051 protein ABCI8, chloroplastic; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: at4g04770 t4b21_16 0.0
N-terminus
uagpf_v2_unigene5931 uagpf v2.0 573
AutoFact: DUF547 domain containing protein 1.0e-14
FL-Next: tr=Electron transporter, putative; Ricinus communis (Castor bean). 0.0
Blast2go: ternary complex factor mip1-like 0.0
C-terminus
uagpf_v2_unigene5942 uagpf v2.0 481
AutoFact: Inositol hexaphosphate kinase, putative n=1 Tax=Ricinus communis RepID=B9RA37_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: inositol polyphosphate multikinase alpha 0.0
C-terminus
uagpf_v2_unigene6151 uagpf v2.0 804
AutoFact: ssDNA-binding transcriptional regulator [Arabidopsis thaliana] gb|AAF43941.1|AC012188_18 Contains similarity to a hypothetical protein from Arabidopsis thaliana gb|AC002521.2. EST gb|AI995686 comes from this gene gb|AAG48815.1|AF332452_1 putative DNA-bind 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: ssdna-binding transcriptional regulator 0.0
C-terminus
uagpf_v2_unigene6473 uagpf v2.0 618
AutoFact: YEATS family protein [Arabidopsis thaliana] dbj|BAB11199.1| unnamed protein product [Arabidopsis thaliana] gb|AAL59945.1| unknown protein [Arabidopsis thaliana] gb|AAM20126.1| unknown protein [Arabidopsis thaliana] gb|AAR28019.1| TAF14b [Arabidopsis thali 0.0
FL-Next: tr=Putative uncharacterized protein; Zea mays (Maize). 0.0
Blast2go: protein af-9 homolog 0.0
N-terminus
uagpf_v2_unigene6513 uagpf v2.0 710
AutoFact: homeodomain-leucine zipper protein 56 [Glycine max] 8.00001e-41
Blast2go: homeobox-leucine zipper protein athb-6-like 0.0
Coding
uagpf_v2_unigene6530 uagpf v2.0 739
AutoFact: Homeobox protein, putative n=1 Tax=Ricinus communis RepID=B9R943_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: homeobox-leucine zipper protein hat5-like 0.0
C-terminus
uagpf_v2_unigene6569 uagpf v2.0 1174
AutoFact: bZIP transcription factor bZIP28 [Glycine max] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: basic leucine zipper transcription factor-like protein 0.0
C-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain