Sustainpine_db
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Assembly Name: uagpf v2.0

Name: regulation of transcription, DNA-dependent

Term: GO:0006355  Help

Source: GO from Blast2go

Ontology: Biological Process

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
uagpf_v2_unigene4278 uagpf v2.0 431
• AutoFact: Putative MYB transcription factor n=1 Tax=Rosa rugosa RepID=F2QKV9_ROSRU 0.0
• Blast2go: myb family transcription factor 0.0
unknown
uagpf_v2_unigene4290 uagpf v2.0 718
• AutoFact: Chitin-inducible gibberellin-responsive protein, putative n=1 Tax=Ricinus communis RepID=B9S2N0_RICCO 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: scarecrow-like protein 1-like 0.0
C-terminus
uagpf_v2_unigene4324 uagpf v2.0 960
• AutoFact: mediator of RNA polymerase II transcription subunit 31 [Arabidopsis thaliana] sp|Q8VYB1.1|MED31_ARATH RecName: Full=Mediator of RNA polymerase II transcription subunit 31; AltName: Full=Mediator complex subunit 31; AltName: Full=Mediator complex subunit S 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: mediator of rna polymerase ii transcription subunit 31 0.0
Complete
uagpf_v2_unigene4438 uagpf v2.0 688
• AutoFact: AP2 domain class transcription factor n=1 Tax=Malus x domestica RepID=D5L102_MALDO 2.0e-18
• Blast2go: ethylene-responsive element binding factor-like protein 1.14863e-21
unknown
uagpf_v2_unigene4441 uagpf v2.0 676
• AutoFact: Transcription factor, putative n=1 Tax=Ricinus communis RepID=B9SRS4_RICCO 2.0e-39
• Blast2go: protein 3.53968e-42
unknown
uagpf_v2_unigene4495 uagpf v2.0 768
• AutoFact: ZEITLUPE n=1 Tax=Mesembryanthemum crystallinum RepID=Q6UEI5_MESCR 0.0
• FL-Next: sp=Adagio-like protein 3; Oryza sativa subsp. japonica (Rice). 0.0
• Blast2go: adagio protein 1 0.0
C-terminus
uagpf_v2_unigene4518 uagpf v2.0 604
• AutoFact: Putative wuschel homeobox protein WOX8/9 n=1 Tax=Picea abies RepID=D5LMH9_PICAB 0.0
• FL-Next: tr=Putative wuschel homeobox protein WOX8/9; Picea abies (Norway spruce) (Picea excelsa). 0.0
• Blast2go: protein 0.0
Internal
uagpf_v2_unigene4572 uagpf v2.0 1322
• AutoFact: Ureidoglycine aminohydrolase n=5 Tax=Brassicaceae RepID=Q8GXV5_ARATH 0.0
• FL-Next: tr=mRNA, clone: RTFL01-03-G21; Thellungiella halophila (Salt cress). 0.0
• Blast2go: ureidoglycine aminohydrolase 0.0
C-terminus
uagpf_v2_unigene4668 uagpf v2.0 564
• AutoFact: Timing of CAB expression 1 protein n=1 Tax=Castanea sativa RepID=Q56TL2_CASSA 0.0
• Blast2go: two-component response regulator-like aprr1-like 0.0
unknown
uagpf_v2_unigene4722 uagpf v2.0 446
• AutoFact: RecName: Full=FACT complex subunit SSRP1; AltName: Full=Facilitates chromatin transcription complex subunit SSRP1; AltName: Full=Recombination signal sequence recognition protein 1 emb|CAA66480.1| transcription factor [Vicia faba var. minor] 0.0
• FL-Next: sp=FACT complex subunit SSRP1-B; Oryza sativa subsp. japonica (Rice). 0.0
• Blast2go: fact complex subunit ssrp1 0.0
Internal
uagpf_v2_unigene4796 uagpf v2.0 758
• AutoFact: Unassigned protein
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: transcription factor egl1 0.0
Putative Complete
uagpf_v2_unigene4803 uagpf v2.0 848
• AutoFact: PREDICTED: similar to DNA gyrase subunit A, chloroplastic/mitochondrial n=1 Tax=Vitis vinifera RepID=UPI0001985B62 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: dna gyrase subunit a 0.0
C-terminus
uagpf_v2_unigene4819 uagpf v2.0 940
• AutoFact: putative AP2/EREBP transcription factor [Arabidopsis thaliana] 2.0e-16
• FL-Next: tr=DREB protein; Taxus cuspidata (Japanese yew). 0.0
• Blast2go: ap2 erf domain-containing transcription factor 8.11769e-19
N-terminus
uagpf_v2_unigene4825 uagpf v2.0 606
• AutoFact: [M] COG0774 UDP-3-O-acyl-N-acetylglucosamine deacetylase 0.0
• FL-Next: Isoform 3 of UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase OS=Arabidopsis thaliana GN=At1g24793 0.0
• Blast2go: udp-3-o- 0.0
C-terminus
uagpf_v2_unigene4879 uagpf v2.0 579
• AutoFact: DNA-binding protein (Fragment) n=1 Tax=Catharanthus roseus RepID=A1DR78_CATRO 2.0e-30
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: hdzip i protein 0.0
Putative C-terminus
uagpf_v2_unigene4929 uagpf v2.0 645
• AutoFact: Squamosa promoter-binding protein, putative n=1 Tax=Ricinus communis RepID=B9R8V3_RICCO 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: squamosa promoter-binding-like protein 14-like 0.0
Putative C-terminus
uagpf_v2_unigene4946 uagpf v2.0 624
• AutoFact: pfam07777, MFMR, G-box binding protein MFMR 0.0
• Blast2go: transcription factor hbp-1a 0.0
unknown
uagpf_v2_unigene5123 uagpf v2.0 531
• AutoFact: protein TWIN LOV 1 [Arabidopsis thaliana] dbj|BAB83170.1| twin LOV protein 1 [Arabidopsis thaliana] gb|AEC05613.1| protein TWIN LOV 1 [Arabidopsis thaliana] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: protein twin lov 1 0.0
Internal
uagpf_v2_unigene5222 uagpf v2.0 753
• AutoFact: zinc finger CCCH domain-containing protein 20 [Arabidopsis thaliana] sp|O82199.1|C3H20_ARATH RecName: Full=Zinc finger CCCH domain-containing protein 20; Short=AtC3H20 gb|AAC62135.1| putative CCCH-type zinc finger protein [Arabidopsis thaliana] gb|AAM6084 0.0
• Blast2go: ccch-type zinc finger protein 0.0
unknown
uagpf_v2_unigene5229 uagpf v2.0 725
• AutoFact: Tubby-like protein n=1 Tax=Physcomitrella patens subsp. patens RepID=A9SPK2_PHYPA 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: tubby-like f-box protein 3 0.0
N-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain