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Assembly Name: uagpf v2.0

Name: regulation of transcription, DNA-dependent

Term: GO:0006355  Help

Source: GO from Blast2go

Ontology: Biological Process


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
uagpf_v2_unigene44437 uagpf v2.0 372
AutoFact: Type I MADS-box transcription factor n=1 Tax=Cryptomeria japonica RepID=B2ZX88_CRYJA 7.0e-33
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: mads-box domain-containing protein 1.4013e-45
N-terminus
uagpf_v2_unigene44569 uagpf v2.0 348
AutoFact: Clavata-like receptor n=1 Tax=Picea glauca RepID=Q19AV8_PICGL 0.0
FL-Next: tr=Clavata-like receptor; Picea glauca (White spruce) (Pinus glauca). 0.0
Blast2go: leucine-rich repeat receptor-like protein kinase 0.0
C-terminus
uagpf_v2_unigene44830 uagpf v2.0 390
AutoFact: Map3k delta-1 protein kinase, putative n=1 Tax=Ricinus communis RepID=B9RZR2_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein kinase 0.0
Internal
uagpf_v2_unigene45047 uagpf v2.0 325
AutoFact: RecName: Full=Squamosa promoter-binding-like protein 15 sp|A2YX04.1|SPL15_ORYSI RecName: Full=Squamosa promoter-binding-like protein 15 dbj|BAD10073.1| putative SPL1-Related2 protein [Oryza sativa Japonica Group] gb|EAZ07615.1| hypothetical protein OsI_29 7.0e-31
FL-Next: sp=Squamosa promoter-binding-like protein 15; Oryza sativa subsp. japonica (Rice). 0.0
Blast2go: squamosa promoter-binding-like protein 14-like 6.92821e-38
Internal
uagpf_v2_unigene45239 uagpf v2.0 358
AutoFact: Phytochrome n=12 Tax=Pinaceae RepID=PHY_PICAB 0.0
FL-Next: sp=Phytochrome; Picea abies (Norway spruce) (Picea excelsa). 0.0
Blast2go: phytochrome 0.0
Internal
uagpf_v2_unigene45406 uagpf v2.0 378
AutoFact: transcription factor TCP9 [Arabidopsis thaliana] sp|O64647.1|TCP9_ARATH RecName: Full=Transcription factor TCP9 gb|AAK43925.1|AF370606_1 putative PCF2-like DNA binding protein [Arabidopsis thaliana] gb|AAC06168.1| putative PCF2-like DNA binding protein [A 1.0e-31
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: transcription factor tcp9-like 1.85e-39
Putative N-terminus
uagpf_v2_unigene45439 uagpf v2.0 381
AutoFact: SNF2 family DNA-dependent ATPase n=1 Tax=Physcomitrella patens subsp. patens RepID=A9S384_PHYPA 4.0e-12
FL-Next: sp=DNA helicase INO80; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: chromatin remodeling complex subunit 7.31578e-12
Internal
uagpf_v2_unigene45637 uagpf v2.0 380
AutoFact: Transcription factor, putative n=1 Tax=Ricinus communis RepID=B9SR79_RICCO 1.0e-30
Blast2go: kanadi like transcription factor 6.16344e-36
Coding
uagpf_v2_unigene45675 uagpf v2.0 263
AutoFact: DELLA domain GRAS family transcription factor rga-like protein n=2 Tax=Populus trichocarpa RepID=B9GV61_POPTR 0.0
FL-Next: sp=DELLA protein SLR1; Oryza sativa subsp. japonica (Rice). 0.0
Blast2go: della protein 0.0
Internal
uagpf_v2_unigene45710 uagpf v2.0 219
AutoFact: class II KNOX homeobox transcription factor [Medicago truncatula] 0.0
Blast2go: homeobox protein knotted-1-like 3-like 0.0
Coding
uagpf_v2_unigene46371 uagpf v2.0 395
AutoFact: putative CCAAT-binding transcription factor [Oryza sativa Japonica Group] 1.0e-39
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: nuclear transcription factor y subunit a-9-like 0.0
Internal
uagpf_v2_unigene46374 uagpf v2.0 315
AutoFact: GRAS family transcription factor n=2 Tax=Populus trichocarpa RepID=B9GTP1_POPTR 0.0
Blast2go: scarecrow-like protein 1-like 0.0
Coding
uagpf_v2_unigene46440 uagpf v2.0 411
AutoFact: Nuclear transcription factor Y subunit C-2 n=2 Tax=Arabidopsis RepID=NFYC2_ARATH 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: nuclear transcription factor y subunit c-2 0.0
N-terminus
uagpf_v2_unigene46507 uagpf v2.0 337
AutoFact: Tubby-like protein n=1 Tax=Physcomitrella patens subsp. patens RepID=A9SPK2_PHYPA 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: tubby-like f-box protein 3 0.0
Internal
uagpf_v2_unigene46797 uagpf v2.0 374
AutoFact: Phytochrome n=12 Tax=Pinaceae RepID=PHY_PICAB 0.0
FL-Next: sp=Phytochrome; Picea abies (Norway spruce) (Picea excelsa). 0.0
Blast2go: phytochrome o 0.0
Internal
uagpf_v2_unigene47073 uagpf v2.0 360
AutoFact: RecName: Full=50S ribosomal protein L4, chloroplastic; Short=R-protein L4; Flags: Precursor pdb|3BBO|G Chain G, Homology Model For The Spinach Chloroplast 50s Subunit Fitted To 9.4a Cryo-Em Map Of The 70s Chlororibosome emb|CAA75149.1| chloroplast ribosom 0.0
Blast2go: 50s ribosomal protein l4 0.0
unknown
uagpf_v2_unigene47165 uagpf v2.0 215
AutoFact: DNA topoisomerase 2 (Fragment) n=1 Tax=Vitis vinifera RepID=D7T341_VITVI 0.0
FL-Next: sp=DNA topoisomerase 2; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: dna topoisomerase ii 0.0
Internal
uagpf_v2_unigene47244 uagpf v2.0 397
AutoFact: myb family transcription factor [Arabidopsis thaliana] gb|AAD25661.1| hypothetical protein [Arabidopsis thaliana] gb|AEC09803.1| myb family transcription factor [Arabidopsis thaliana] 1.0e-08
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: myb family transcription factor 1.08687e-11
Internal
uagpf_v2_unigene47729 uagpf v2.0 402
AutoFact: AP2 domain containing protein 3.0e-13
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: dre binding factor 2 2.27499e-33
N-terminus
uagpf_v2_unigene48019 uagpf v2.0 329
AutoFact: DUF1664 domain containing protein 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain