Sustainpine_db
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Assembly Name: uagpf v2.0

Name: regulation of transcription, DNA-dependent

Term: GO:0006355  Help

Source: GO from Blast2go

Ontology: Biological Process

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
uagpf_v2_unigene40950 uagpf v2.0 222
• AutoFact: Histone acetyltransferase n=5 Tax=rosids RepID=B9H794_POPTR 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: histone acetyltransferase 0.0
N-terminus
uagpf_v2_unigene41208 uagpf v2.0 416
• AutoFact: R2R3-MYB transcription factor MYB11 [Picea glauca] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: protein 0.0
Putative N-terminus
uagpf_v2_unigene41507 uagpf v2.0 342
• AutoFact: DNA helicase INO80 complex-like 1 [Arabidopsis thaliana] sp|Q8RXS6.2|INO80_ARATH RecName: Full=DNA helicase INO80; Short=AtINO80; AltName: Full=Putative DNA helicase INO80 complex homolog 1 gb|AEE79637.1| DNA helicase INO80 complex-like 1 [Arabidopsis tha 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: dna helicase ino80 complex-like 1 0.0
Internal
uagpf_v2_unigene41916 uagpf v2.0 357
• AutoFact: ZF-HD homeobox protein [Arabidopsis thaliana] sp|Q9SB61.1|Y4466_ARATH RecName: Full=ZF-HD homeobox protein At4g24660; Short=AtHB-22 gb|AAL27510.1|AF439841_1 AT4g24660/F22K18_140 [Arabidopsis thaliana] emb|CAA22997.1| putative protein [Arabidopsis thaliana 1.0e-18
• Blast2go: zf-hd homeobox protein at4g24660-like 1.56549e-30
Coding
uagpf_v2_unigene42123 uagpf v2.0 419
• AutoFact: Ubiquinone biosynthesis protein coq-8, putative n=1 Tax=Ricinus communis RepID=B9RN20_RICCO 7.9874e-44
• FL-Next: tr=Ubiquinone biosynthesis protein coq-8, putative; Ricinus communis (Castor bean). 0.0
• Blast2go: chaperone activity of bc1 complex- mitochondrial-like 0.0
Internal
uagpf_v2_unigene42314 uagpf v2.0 408
• AutoFact: Histidine kinase osmosensor protein n=1 Tax=Populus trichocarpa RepID=B9GYZ6_POPTR 2.0e-17
• Blast2go: histidine kinase osmosensor protein 1.71069e-19
unknown
uagpf_v2_unigene42638 uagpf v2.0 297
• AutoFact: WRKY DNA-binding protein 21 [Arabidopsis thaliana] sp|O04336.1|WRK21_ARATH RecName: Full=Probable WRKY transcription factor 21; AltName: Full=WRKY DNA-binding protein 21 gb|AAK28441.1|AF272747_1 WRKY DNA-binding protein 21 [Arabidopsis thaliana] gb|AAB630 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: wrky dna-binding protein 21 0.0
Internal
uagpf_v2_unigene42789 uagpf v2.0 324
• AutoFact: DNA-directed RNA polymerase n=1 Tax=Physcomitrella patens subsp. patens RepID=A9RNX6_PHYPA 0.0
• FL-Next: sp=DNA-directed RNA polymerase II subunit RPB2; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Blast2go: protein 0.0
Internal
uagpf_v2_unigene42821 uagpf v2.0 276
• AutoFact: transcription factor bHLH66 [Arabidopsis thaliana] sp|Q9ZUG9.1|BH066_ARATH RecName: Full=Transcription factor bHLH66; AltName: Full=Basic helix-loop-helix protein 66; Short=AtbHLH66; Short=bHLH 66; AltName: Full=Transcription factor EN 95; AltName: Full=b 9.94922e-44
• Blast2go: protein 0.0
unknown
uagpf_v2_unigene42904 uagpf v2.0 306
• AutoFact: Tubby-like protein n=1 Tax=Physcomitrella patens subsp. patens RepID=A9SPK2_PHYPA 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: tubby-like f-box protein 3 0.0
Internal
uagpf_v2_unigene43055 uagpf v2.0 264
• AutoFact: WD repeat-containing protein 5 [Danio rerio] gb|AAH52124.1| Wdr5 protein [Danio rerio] gb|AAH66729.1| Wdr5 protein [Danio rerio] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: wd40 repeat compass complex protein 0.0
N-terminus
uagpf_v2_unigene43311 uagpf v2.0 286
• AutoFact: protein kinase [Spinacia oleracea] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: phototropin 2 0.0
Putative N-terminus
uagpf_v2_unigene43387 uagpf v2.0 470
• AutoFact: Myb [Nicotiana tabacum] 7.0e-26
• FL-Next: sp=Myb-related protein 3R-1; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Blast2go: myb-related protein 3r-1-like 1.14511e-28
Internal
uagpf_v2_unigene43390 uagpf v2.0 265
• AutoFact: putative helicase [Arabidopsis thaliana] 0.0
• FL-Next: sp=DNA helicase INO80; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Blast2go: dna helicase ino80-like 0.0
Internal
uagpf_v2_unigene43603 uagpf v2.0 350
• AutoFact: Drought responsive element binding protein 2 n=3 Tax=Glycine max RepID=C5IU97_SOYBN 1.0e-30
• FL-Next: tr=Transcription factor AP2; Taxus cuspidata (Japanese yew). 0.0
• Blast2go: dehydration-responsive element binding protein 2 1.38465e-38
Internal
uagpf_v2_unigene43656 uagpf v2.0 348
• AutoFact: DNA topoisomerase 2 (Fragment) n=1 Tax=Vitis vinifera RepID=D7T341_VITVI 0.0
• FL-Next: sp=DNA topoisomerase 2; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Blast2go: dna topoisomerase ii 0.0
Internal
uagpf_v2_unigene43732 uagpf v2.0 343
• AutoFact: Male-specific transcription factor M88B7.2 n=1 Tax=Marchantia polymorpha RepID=Q6J3Q5_MARPO 0.0
• Blast2go: protein 0.0
Coding
uagpf_v2_unigene43788 uagpf v2.0 309
• AutoFact: Myb [Nicotiana tabacum] 7.0e-26
• Blast2go: myb-related protein 3r-1-like 1.14511e-28
Putative coding
uagpf_v2_unigene43895 uagpf v2.0 222
• AutoFact: aprataxin [Arabidopsis thaliana] sp|Q9M041.1|BH140_ARATH RecName: Full=Transcription factor bHLH140; AltName: Full=Basic helix-loop-helix protein 140; Short=AtbHLH140; Short=bHLH 140; AltName: Full=Transcription factor EN 122; AltName: Full=bHLH transcrip 5.0e-32
• FL-Next: sp=Transcription factor bHLH140; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Blast2go: transcription factor bhlh140-like 2.10195e-43
Internal
uagpf_v2_unigene44399 uagpf v2.0 314
• AutoFact: DUF547 domain containing protein 1.0e-14
• Blast2go: ternary complex factor mip1-like 0.0
Putative coding

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain