Sustainpine_db
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Assembly Name: uagpf v2.0

Name: regulation of transcription, DNA-dependent

Term: GO:0006355  Help

Source: GO from Blast2go

Ontology: Biological Process

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
uagpf_v2_unigene37447 uagpf v2.0 361
• AutoFact: DNA topoisomerase 2 (Fragment) n=1 Tax=Vitis vinifera RepID=D7T341_VITVI 0.0
• FL-Next: sp=DNA topoisomerase 2; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Blast2go: dna topoisomerase ii 0.0
N-terminus
uagpf_v2_unigene37487 uagpf v2.0 455
• AutoFact: Class III homeodomain leucine zipper protein n=18 Tax=Spermatophyta RepID=E7DX24_PICGL 0.0
• Blast2go: homeodomain-leucine zipper trancription factor hb-3 0.0
unknown
uagpf_v2_unigene37692 uagpf v2.0 410
• AutoFact: sensory transduction histidine kinase [Rhodopirellula baltica SH 1] emb|CAD71417.1| sensory transduction histidine kinase [Rhodopirellula baltica SH 1] 3.0e-21
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: sensory transduction histidine kinase 0.0
Internal
uagpf_v2_unigene37711 uagpf v2.0 368
• AutoFact: Os03g0191000 protein n=2 Tax=Oryza sativa Japonica Group RepID=Q0DUE4_ORYSJ 4.0e-13
• Blast2go: calmodulin-binding transcription activator 2 1.2504e-13
unknown
uagpf_v2_unigene37863 uagpf v2.0 437
• AutoFact: putative CCAAT-binding transcription factor [Oryza sativa Japonica Group] 1.0e-39
• Blast2go: nuclear transcription factor y subunit a-9-like 0.0
unknown
uagpf_v2_unigene37906 uagpf v2.0 382
• AutoFact: high mobility group-box and ARID domain-binding domain-containing protein [Arabidopsis thaliana] sp|Q9MAT6.1|HMG15_ARATH RecName: Full=High mobility group B protein 15; AltName: Full=Nucleosome/chromatin assembly factor group D 15 gb|AAF40449.1|AC004809_7 0.0
• Blast2go: high mobility group family 0.0
Coding
uagpf_v2_unigene38049 uagpf v2.0 388
• AutoFact: Phytochrome n=1 Tax=Marchantia paleacea var. diptera RepID=Q9AVP3_MARPA 0.0
• Blast2go: phytochrome 0.0
unknown
uagpf_v2_unigene38052 uagpf v2.0 358
• AutoFact: Putative MYB transcription factor n=1 Tax=Rosa rugosa RepID=F2QKV9_ROSRU 0.0
• Blast2go: myb family transcription factor 0.0
unknown
uagpf_v2_unigene38068 uagpf v2.0 511
• AutoFact: protein DP-E2F-like 1 [Arabidopsis thaliana] emb|CAD10633.1| transcription factor E2Fe [Arabidopsis thaliana] gb|AEE78374.1| protein DP-E2F-like 1 [Arabidopsis thaliana] 2.0e-34
• FL-Next: Isoform 2 of E2F transcription factor-like E2FE OS=Arabidopsis thaliana GN=E2FE 0.0
• Blast2go: antagonist of e2f-dp complex 0.0
Internal
uagpf_v2_unigene38300 uagpf v2.0 448
• AutoFact: CCAAT-box binding factor HAP3 n=3 Tax=Selaginella moellendorffii RepID=D8RRZ5_SELML 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: ccaat-box binding factor hap3 0.0
N-terminus
uagpf_v2_unigene38354 uagpf v2.0 207
• AutoFact: RecName: Full=Homeobox-leucine zipper protein HOX11; AltName: Full=HD-ZIP protein HOX11; AltName: Full=Homeodomain transcription factor HOX11; AltName: Full=OsHox11 dbj|BAD38229.1| putative homeodomain leucine zipper protein CPHB-3 [Oryza sativa Japonica 4.0e-13
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: homeobox-leucine zipper protein hat14-like 0.0
Internal
uagpf_v2_unigene38361 uagpf v2.0 436
• AutoFact: Phytochrome n=43 Tax=Spermatophyta RepID=PHY_PINSY 0.0
• FL-Next: sp=Phytochrome; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: phytochrome p 0.0
Putative N-terminus
uagpf_v2_unigene38411 uagpf v2.0 325
• AutoFact: Heat Shock Factor 3 [Arabidopsis thaliana] 1.0e-15
• Blast2go: heat stress transcription factor a-4a-like 2.43562e-16
unknown
uagpf_v2_unigene38449 uagpf v2.0 455
• AutoFact: putative PHD zinc finger protein [Ipomoea trifida] dbj|BAF36299.1| hypothetical protein [Ipomoea trifida] 0.0
• FL-Next: tr=PHD finger family protein; Arabidopsis lyrata subsp. lyrata (Lyre-leaved rock-cress). 0.0
• Blast2go: dna binding 0.0
Internal
uagpf_v2_unigene38669 uagpf v2.0 356
• AutoFact: Transcription factor AP2-EREBP n=1 Tax=Lotus japonicus RepID=B3IX32_LOTJA 7.0e-35
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: ethylene-responsive transcription factor 1a 0.0
C-terminus
uagpf_v2_unigene38688 uagpf v2.0 554
• AutoFact: DNA topoisomerase 2 (Fragment) n=1 Tax=Vitis vinifera RepID=D7T341_VITVI 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: dna topoisomerase ii 0.0
Internal
uagpf_v2_unigene38881 uagpf v2.0 332
• AutoFact: WRKY transcription factor 1 (Fragment) n=1 Tax=Picea abies RepID=B2KZJ7_PICAB 2.00386e-43
• Blast2go: wrky transcription factor 6 0.0
Putative coding
uagpf_v2_unigene38897 uagpf v2.0 360
• AutoFact: AP2 domain class transcription factor n=1 Tax=Malus x domestica RepID=D5L0Z0_MALDO 4.0e-27
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: ap2 erf domain-containing transcription factor 0.0
Putative C-terminus
uagpf_v2_unigene38931 uagpf v2.0 273
• AutoFact: Phytochrome n=1 Tax=Marchantia paleacea var. diptera RepID=Q9AVP3_MARPA 0.0
• FL-Next: sp=Phytochrome; Pinus sylvestris (Scots pine). 0.0
• Blast2go: phytochrome 0.0
Internal
uagpf_v2_unigene39045 uagpf v2.0 341
• AutoFact: WRKY DNA-binding protein 21 [Arabidopsis thaliana] sp|O04336.1|WRK21_ARATH RecName: Full=Probable WRKY transcription factor 21; AltName: Full=WRKY DNA-binding protein 21 gb|AAK28441.1|AF272747_1 WRKY DNA-binding protein 21 [Arabidopsis thaliana] gb|AAB630 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: wrky dna-binding protein 21 0.0
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain