Sustainpine_db
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Assembly Name: uagpf v2.0

Name: regulation of transcription, DNA-dependent

Term: GO:0006355  Help

Source: GO from Blast2go

Ontology: Biological Process

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
uagpf_v2_unigene34494 uagpf v2.0 449
• AutoFact: DNA-directed RNA polymerase n=1 Tax=Physcomitrella patens subsp. patens RepID=A9RNX6_PHYPA 0.0
• FL-Next: sp=DNA-directed RNA polymerase II subunit RPB2; Solanum lycopersicum (Tomato) (Lycopersicon esculentum). 0.0
• Blast2go: protein 0.0
Internal
uagpf_v2_unigene35164 uagpf v2.0 284
• AutoFact: ZEITLUPE n=1 Tax=Mesembryanthemum crystallinum RepID=Q6UEI5_MESCR 0.0
• FL-Next: sp=Adagio-like protein 1; Oryza sativa subsp. japonica (Rice). 0.0
• Blast2go: adagio protein 1 0.0
Internal
uagpf_v2_unigene35252 uagpf v2.0 244
• AutoFact: Ethylene responsive element binding protein 1 n=1 Tax=Gossypium barbadense RepID=A3FMG9_GOSBA 2.0e-24
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: ethylene-responsive transcription factor 1a 0.0
Internal
uagpf_v2_unigene35551 uagpf v2.0 287
• AutoFact: Transcription factor, putative n=1 Tax=Ricinus communis RepID=B9RZ39_RICCO 0.0
• Blast2go: nac domain ipr003441 0.0
Putative coding
uagpf_v2_unigene35752 uagpf v2.0 178
• AutoFact: transcription factor TCP4 [Arabidopsis thaliana] ref|NP_850589.1| transcription factor TCP4 [Arabidopsis thaliana] ref|NP_001189896.1| transcription factor TCP4 [Arabidopsis thaliana] sp|Q8LPR5.1|TCP4_ARATH RecName: Full=Transcription factor TCP4; AltName 9.0e-34
• Blast2go: transcription factor tcp4 4.49701e-39
unknown
uagpf_v2_unigene35863 uagpf v2.0 246
• AutoFact: Plastid sigma facor SIG2 n=2 Tax=Physcomitrella patens RepID=E1C9M6_PHYPA 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: rna sigma 70 subfamily 0.0
Putative C-terminus
uagpf_v2_unigene35992 uagpf v2.0 668
• AutoFact: Actin related protein n=1 Tax=Populus trichocarpa RepID=B9IMW6_POPTR 6.0e-31
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: actin-related protein 6 3.17408e-36
C-terminus
uagpf_v2_unigene36183 uagpf v2.0 616
• AutoFact: bZIP transcription factor [Malus x domestica] 3.0e-23
• Blast2go: bzip transcription factor 1.00155e-23
unknown
uagpf_v2_unigene36315 uagpf v2.0 428
• AutoFact: Predicted protein n=2 Tax=Hordeum vulgare RepID=F2E947_HORVD 3.00004e-41
• Blast2go: gaga-binding transcriptional activator 0.0
unknown
uagpf_v2_unigene36322 uagpf v2.0 719
• AutoFact: Arsenite-resistance protein, putative n=1 Tax=Ricinus communis RepID=B9S6M6_RICCO 0.0
• Blast2go: serrate rna effector molecule-like 0.0
unknown
uagpf_v2_unigene36438 uagpf v2.0 614
• AutoFact: Transcription factor (Fragment) n=1 Tax=Lycoris longituba RepID=D6MK34_9ASPA 2.0e-18
• FL-Next: tr=Transcription factor AP2; Taxus cuspidata (Japanese yew). 0.0
• Blast2go: ap2 erf domain-containing transcription factor 9.23558e-23
Putative C-terminus
uagpf_v2_unigene36501 uagpf v2.0 605
• AutoFact: type II homeodomain-leucine zipper protein [Medicago sativa] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: protein 0.0
C-terminus
uagpf_v2_unigene36647 uagpf v2.0 603
• AutoFact: Scarecrow-like 1 transcription factor (Fragment) n=1 Tax=Pinus pinaster RepID=B1PPU0_PINPS 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: gras family transcription factor 0.0
C-terminus
uagpf_v2_unigene36697 uagpf v2.0 399
• AutoFact: high mobility group-box and ARID domain-binding domain-containing protein [Arabidopsis thaliana] sp|Q9MAT6.1|HMG15_ARATH RecName: Full=High mobility group B protein 15; AltName: Full=Nucleosome/chromatin assembly factor group D 15 gb|AAF40449.1|AC004809_7 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: high mobility group family 0.0
Internal
uagpf_v2_unigene36726 uagpf v2.0 357
• AutoFact: RecName: Full=FACT complex subunit SSRP1; AltName: Full=Facilitates chromatin transcription complex subunit SSRP1; AltName: Full=Recombination signal sequence recognition protein 1 emb|CAA66480.1| transcription factor [Vicia faba var. minor] 0.0
• FL-Next: Isoform 2 of FACT complex subunit SSRP1 OS=Arabidopsis thaliana GN=SSRP1 0.0
• Blast2go: fact complex subunit ssrp1 0.0
Internal
uagpf_v2_unigene36811 uagpf v2.0 520
• AutoFact: PREDICTED: similar to DNA gyrase subunit A, chloroplastic/mitochondrial n=1 Tax=Vitis vinifera RepID=UPI0001985B62 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: dna gyrase subunit a 0.0
Complete
uagpf_v2_unigene37090 uagpf v2.0 664
• AutoFact: pfam07777, MFMR, G-box binding protein MFMR 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: transcription factor hbp-1a 0.0
N-terminus
uagpf_v2_unigene37297 uagpf v2.0 437
• AutoFact: Predicted protein (Fragment) n=2 Tax=Physcomitrella patens RepID=A9RYR4_PHYPA 0.0
• Blast2go: myb-related protein 3r-1-like 0.0
unknown
uagpf_v2_unigene37317 uagpf v2.0 438
• AutoFact: Chitin-inducible gibberellin-responsive protein, putative n=1 Tax=Ricinus communis RepID=B9S2N0_RICCO 0.0
• FL-Next: tr=SCARECROW-like protein 1; Pinus radiata (Monterey pine) (Pinus insignis). 0.0
• Blast2go: scarecrow-like protein 1-like 0.0
Internal
uagpf_v2_unigene37350 uagpf v2.0 319
• AutoFact: Global transcription factor group (Fragment) n=1 Tax=Populus trichocarpa RepID=B9I6M9_POPTR 0.0
• FL-Next: sp=FACT complex subunit SPT16; Zea mays (Maize). 0.0
• Blast2go: global transcription factor group 0.0
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain