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Assembly Name: uagpf v2.0

Name: regulation of transcription, DNA-dependent

Term: GO:0006355  Help

Source: GO from Blast2go

Ontology: Biological Process

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
uagpf_v2_unigene32167 uagpf v2.0 532
• AutoFact: BZIP transcription factor n=2 Tax=core eudicotyledons RepID=Q93YM7_TOBAC 0.0
• Blast2go: light-inducible protein cprf2-like 0.0
unknown
uagpf_v2_unigene32219 uagpf v2.0 409
• AutoFact: Transcription factor SCREAM2 n=2 Tax=Arabidopsis RepID=SCRM2_ARATH 6.0e-19
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: inducer of cbf expression 3.25179e-37
C-terminus
uagpf_v2_unigene32397 uagpf v2.0 270
• AutoFact: Shwachman-Bodian-Diamond syndrome protein, putative n=1 Tax=Ricinus communis RepID=B9S2M8_RICCO 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: protein 0.0
Internal
uagpf_v2_unigene32437 uagpf v2.0 480
• AutoFact: transcription factor TCP4 [Arabidopsis thaliana] ref|NP_850589.1| transcription factor TCP4 [Arabidopsis thaliana] ref|NP_001189896.1| transcription factor TCP4 [Arabidopsis thaliana] sp|Q8LPR5.1|TCP4_ARATH RecName: Full=Transcription factor TCP4; AltName 9.0e-34
• Blast2go: transcription factor tcp4 4.49701e-39
unknown
uagpf_v2_unigene32450 uagpf v2.0 379
• AutoFact: ZF-HD homeobox protein [Arabidopsis thaliana] sp|Q9SB61.1|Y4466_ARATH RecName: Full=ZF-HD homeobox protein At4g24660; Short=AtHB-22 gb|AAL27510.1|AF439841_1 AT4g24660/F22K18_140 [Arabidopsis thaliana] emb|CAA22997.1| putative protein [Arabidopsis thaliana 1.0e-18
• Blast2go: zf-hd homeobox protein at4g24660-like 1.56549e-30
unknown
uagpf_v2_unigene32563 uagpf v2.0 325
• AutoFact: TGA-type basic leucine zipper protein TGA2.1 [Phaseolus vulgaris] 0.0
• FL-Next: sp=Transcription factor HBP-1b(c38); Triticum aestivum (Wheat). 0.0
• Blast2go: bzip transcription factor 0.0
Internal
uagpf_v2_unigene32809 uagpf v2.0 268
• AutoFact: Scarecrow-like 1 transcription factor (Fragment) n=1 Tax=Pinus pinaster RepID=B1PPU0_PINPS 0.0
• Blast2go: gras family transcription factor 0.0
unknown
uagpf_v2_unigene32933 uagpf v2.0 204
• AutoFact: Myb-related transcription factor n=1 Tax=Solanum lycopersicum RepID=Q40173_SOLLC 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: myb-related transcription factor 0.0
N-terminus
uagpf_v2_unigene33130 uagpf v2.0 361
• AutoFact: mediator of RNA polymerase II transcription subunit 31 [Arabidopsis thaliana] sp|Q8VYB1.1|MED31_ARATH RecName: Full=Mediator of RNA polymerase II transcription subunit 31; AltName: Full=Mediator complex subunit 31; AltName: Full=Mediator complex subunit S 0.0
• Blast2go: mediator of rna polymerase ii transcription subunit 31 0.0
unknown
uagpf_v2_unigene33249 uagpf v2.0 282
• AutoFact: DNA helicase INO80 complex-like 1 [Arabidopsis thaliana] sp|Q8RXS6.2|INO80_ARATH RecName: Full=DNA helicase INO80; Short=AtINO80; AltName: Full=Putative DNA helicase INO80 complex homolog 1 gb|AEE79637.1| DNA helicase INO80 complex-like 1 [Arabidopsis tha 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: chromatin remodeling complex subunit 0.0
Putative N-terminus
uagpf_v2_unigene33281 uagpf v2.0 267
• AutoFact: Male-specific transcription factor M88B7.2 n=1 Tax=Marchantia polymorpha RepID=Q6J3Q5_MARPO 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: protein 0.0
Internal
uagpf_v2_unigene33310 uagpf v2.0 417
• AutoFact: class II KNOX homeobox transcription factor [Medicago truncatula] 0.0
• Blast2go: homeobox protein knotted-1-like 3-like 0.0
unknown
uagpf_v2_unigene33530 uagpf v2.0 243
• AutoFact: phaseolin G-box binding protein PG2 [Phaseolus vulgaris] 1.4013e-45
• Blast2go: transcription factor 0.0
unknown
uagpf_v2_unigene33649 uagpf v2.0 364
• AutoFact: TGA-type basic leucine zipper protein TGA2.1 [Phaseolus vulgaris] 0.0
• Blast2go: transcription factor hbp-1b 0.0
unknown
uagpf_v2_unigene33789 uagpf v2.0 187
• AutoFact: Predicted protein (Fragment) n=2 Tax=Physcomitrella patens RepID=A9RYR4_PHYPA 0.0
• FL-Next: tr=R2R3-MYB transcription factor MYB6; Picea glauca (White spruce) (Pinus glauca). 0.0
• Blast2go: myb-related protein 3r-1-like 0.0
Internal
uagpf_v2_unigene33862 uagpf v2.0 235
• AutoFact: Phytochrome n=1 Tax=Marchantia paleacea var. diptera RepID=Q9AVP3_MARPA 0.0
• FL-Next: sp=Phytochrome; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: phytochrome 0.0
Internal
uagpf_v2_unigene34062 uagpf v2.0 404
• AutoFact: GRAS family transcription factor n=1 Tax=Populus trichocarpa RepID=B9IAQ7_POPTR 0.0
• Blast2go: gras family transcription factor 0.0
unknown
uagpf_v2_unigene34249 uagpf v2.0 486
• AutoFact: Transcriptional factor TINY, putative n=1 Tax=Ricinus communis RepID=B9RQZ6_RICCO 3.0e-26
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: ap2 erf domain-containing transcription factor 0.0
C-terminus
uagpf_v2_unigene34304 uagpf v2.0 362
• AutoFact: type-B response regulator [Catharanthus roseus] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: type-b response regulator 0.0
Internal
uagpf_v2_unigene34363 uagpf v2.0 307
• AutoFact: high mobility group-box and ARID domain-binding domain-containing protein [Arabidopsis thaliana] sp|Q9MAT6.1|HMG15_ARATH RecName: Full=High mobility group B protein 15; AltName: Full=Nucleosome/chromatin assembly factor group D 15 gb|AAF40449.1|AC004809_7 0.0
• Blast2go: high mobility group family 0.0
unknown

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain