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Assembly Name: uagpf v2.0

Name: regulation of transcription, DNA-dependent

Term: GO:0006355  Help

Source: GO from Blast2go

Ontology: Biological Process

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
uagpf_v2_unigene12906 uagpf v2.0 619
• AutoFact: type II homeodomain-leucine zipper protein [Medicago sativa] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: protein 0.0
C-terminus
uagpf_v2_unigene13049 uagpf v2.0 660
• AutoFact: GRAS family transcription factor n=2 Tax=Populus trichocarpa RepID=B9GTP1_POPTR 0.0
• Blast2go: scarecrow-like protein 1-like 0.0
Putative coding
uagpf_v2_unigene13125 uagpf v2.0 422
• AutoFact: Histone deacetylase (Fragment) n=7 Tax=rosids RepID=D7SM47_VITVI 0.0
• Blast2go: histone deacetylase 0.0
unknown
uagpf_v2_unigene13310 uagpf v2.0 524
• AutoFact: TGA-type basic leucine zipper protein TGA2.1 [Phaseolus vulgaris] 0.0
• Blast2go: bzip transcription factor 0.0
unknown
uagpf_v2_unigene13397 uagpf v2.0 385
• AutoFact: Transcription factor, putative n=1 Tax=Ricinus communis RepID=B9SGW9_RICCO 9.80909e-45
• Blast2go: two-component response regulator ehd1 0.0
unknown
uagpf_v2_unigene13447 uagpf v2.0 1340
• AutoFact: high mobility group-box and ARID domain-binding domain-containing protein [Arabidopsis thaliana] sp|Q9MAT6.1|HMG15_ARATH RecName: Full=High mobility group B protein 15; AltName: Full=Nucleosome/chromatin assembly factor group D 15 gb|AAF40449.1|AC004809_7 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: high mobility group family 0.0
N-terminus
uagpf_v2_unigene13532 uagpf v2.0 860
• AutoFact: AG-motif binding protein-4 [Nicotiana tabacum] 8.0e-37
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: gata binding protein 1 0.0
N-terminus
uagpf_v2_unigene13566 uagpf v2.0 480
• AutoFact: auxin-responsive protein IAA13 [Arabidopsis thaliana] ref|NP_001118434.1| auxin-responsive protein IAA13 [Arabidopsis thaliana] gb|AAG48763.1|AF332399_1 auxin-regulated protein IAA13 [Arabidopsis thaliana] gb|AAC49054.1| IAA13 [Arabidopsis thaliana] gb|AA 2.0e-10
• Blast2go: auxin-responsive protein iaa13 6.91375e-17
unknown
uagpf_v2_unigene13592 uagpf v2.0 771
• AutoFact: Zinc finger protein 622 [Arabidopsis thaliana] gb|AAN12920.1| putative zinc finger protein [Arabidopsis thaliana] gb|AEE85908.1| Zinc finger protein 622 [Arabidopsis thaliana] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: zinc finger protein 622 0.0
C-terminus
uagpf_v2_unigene13622 uagpf v2.0 897
• AutoFact: TGA-type basic leucine zipper protein TGA2.1 [Phaseolus vulgaris] 0.0
• FL-Next: sp=Transcription factor HBP-1b(c38); Triticum aestivum (Wheat). 0.0
• Blast2go: transcription factor hbp-1b 0.0
C-terminus
uagpf_v2_unigene13848 uagpf v2.0 353
• AutoFact: Male-specific transcription factor M88B7.2 n=1 Tax=Marchantia polymorpha RepID=Q6J3Q5_MARPO 0.0
• Blast2go: protein 0.0
unknown
uagpf_v2_unigene13934 uagpf v2.0 1094
• AutoFact: ATP-binding cassette transporter, subfamily I, member 15, ABC component protein PpABCI15 (Fragment) n=2 Tax=Physcomitrella patens subsp. patens RepID=A9RAW0_PHYPA 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: at4g04770 t4b21_16 0.0
C-terminus
uagpf_v2_unigene14243 uagpf v2.0 852
• AutoFact: RNA polymerase II transcriptional coactivator KIWI n=4 Tax=Arabidopsis RepID=KIWI_ARATH 9.0e-26
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: rna polymerase ii transcriptional coactivator kiwi 0.0
Complete
uagpf_v2_unigene14340 uagpf v2.0 660
• AutoFact: Tubby-like protein n=1 Tax=Physcomitrella patens subsp. patens RepID=A9SPK2_PHYPA 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: tubby-like f-box protein 3 0.0
C-terminus
uagpf_v2_unigene14402 uagpf v2.0 797
• AutoFact: sequence-specific DNA binding transcription factor [Arabidopsis thaliana] emb|CAB81804.1| putative protein [Arabidopsis thaliana] gb|AAM60968.1| unknown [Arabidopsis thaliana] gb|AAM98182.1| putative protein [Arabidopsis thaliana] gb|AAP13430.1| At3g54390 1.0e-06
• Blast2go: protein 2.66892e-10
Coding
uagpf_v2_unigene14436 uagpf v2.0 878
• AutoFact: TGA-type basic leucine zipper protein TGA2.2 [Phaseolus vulgaris] 0.0
• FL-Next: sp=TGACG-sequence-specific DNA-binding protein TGA-2.1; Nicotiana tabacum (Common tobacco). 0.0
• Blast2go: tga transcription factor 0.0
C-terminus
uagpf_v2_unigene14444 uagpf v2.0 940
• AutoFact: CCAAT-box binding factor HAP3 n=3 Tax=Selaginella moellendorffii RepID=D8RRZ5_SELML 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: ccaat-box binding factor hap3 0.0
C-terminus
uagpf_v2_unigene14461 uagpf v2.0 491
• AutoFact: WRKY DNA-binding protein 21 [Arabidopsis thaliana] sp|O04336.1|WRK21_ARATH RecName: Full=Probable WRKY transcription factor 21; AltName: Full=WRKY DNA-binding protein 21 gb|AAK28441.1|AF272747_1 WRKY DNA-binding protein 21 [Arabidopsis thaliana] gb|AAB630 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: wrky dna-binding protein 21 0.0
N-terminus
uagpf_v2_unigene14539 uagpf v2.0 799
• AutoFact: Transcription factor RF2a, putative n=1 Tax=Ricinus communis RepID=B9SU10_RICCO 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: transcription factor 21 0.0
Putative N-terminus
uagpf_v2_unigene14630 uagpf v2.0 498
• AutoFact: sensory transduction histidine kinase [Rhodopirellula baltica SH 1] emb|CAD71417.1| sensory transduction histidine kinase [Rhodopirellula baltica SH 1] 3.0e-21
• Blast2go: sensory transduction histidine kinase 0.0
unknown

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain