Sustainpine_db
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Assembly Name: uagpf v2.0

Name: sequence-specific DNA binding transcription factor activity

Term: GO:0003700  Help

Source: GO from Blast2go

Ontology: Molecular Function

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
uagpf_v2_unigene3788 uagpf v2.0 571
• AutoFact: Myb-related transcription factor n=1 Tax=Solanum lycopersicum RepID=Q40173_SOLLC 0.0
• Blast2go: myb-related transcription factor 0.0
Putative coding
uagpf_v2_unigene3955 uagpf v2.0 462
• AutoFact: putative DNA-binding protein [Arabidopsis thaliana] emb|CAB77810.1| putative DNA-binding protein [Arabidopsis thaliana] emb|CAD29664.1| homeodomain protein 14 [Arabidopsis thaliana] gb|ABH04479.1| At4g03250 [Arabidopsis thaliana] 3.0e-33
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: homeobox-leucine zipper family protein 0.0
Internal
uagpf_v2_unigene4004 uagpf v2.0 611
• AutoFact: PGAP1 domain containing protein 9.0e-05
• FL-Next: tr=Putative uncharacterized protein; Ricinus communis (Castor bean). 0.0
• Blast2go: uncharacterized protein loc100247423 0.0
C-terminus
uagpf_v2_unigene4049 uagpf v2.0 1470
• AutoFact: EREBP-3 homolog n=2 Tax=Stylosanthes hamata RepID=Q9ZR83_STYHA 2.0e-17
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: ethylene-responsive element binding factor-like protein 7.20587e-20
Putative C-terminus
uagpf_v2_unigene4110 uagpf v2.0 1011
• AutoFact: JmjC domain containing protein 3.0e-13
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: transcription factor jumonji domain-containing protein 0.0
Putative C-terminus
uagpf_v2_unigene4157 uagpf v2.0 1611
• AutoFact: Putative MYB transcription factor n=1 Tax=Rosa rugosa RepID=F2QKV9_ROSRU 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: myb family transcription factor 0.0
C-terminus
uagpf_v2_unigene4278 uagpf v2.0 431
• AutoFact: Putative MYB transcription factor n=1 Tax=Rosa rugosa RepID=F2QKV9_ROSRU 0.0
• Blast2go: myb family transcription factor 0.0
unknown
uagpf_v2_unigene4290 uagpf v2.0 718
• AutoFact: Chitin-inducible gibberellin-responsive protein, putative n=1 Tax=Ricinus communis RepID=B9S2N0_RICCO 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: scarecrow-like protein 1-like 0.0
C-terminus
uagpf_v2_unigene4438 uagpf v2.0 688
• AutoFact: AP2 domain class transcription factor n=1 Tax=Malus x domestica RepID=D5L102_MALDO 2.0e-18
• Blast2go: ethylene-responsive element binding factor-like protein 1.14863e-21
unknown
uagpf_v2_unigene4518 uagpf v2.0 604
• AutoFact: Putative wuschel homeobox protein WOX8/9 n=1 Tax=Picea abies RepID=D5LMH9_PICAB 0.0
• FL-Next: tr=Putative wuschel homeobox protein WOX8/9; Picea abies (Norway spruce) (Picea excelsa). 0.0
• Blast2go: protein 0.0
Internal
uagpf_v2_unigene4539 uagpf v2.0 771
• AutoFact: casein kinase 2, alpha polypeptide [Arabidopsis thaliana] gb|AAC17823.1| putative casein kinase II catalytic (alpha) subunit [Arabidopsis thaliana] gb|AAL32709.1| putative casein kinase II catalytic (alpha) subunit [Arabidopsis thaliana] gb|AAM10040.1| pu 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: casein kinase ii alpha subunit 0.0
N-terminus
uagpf_v2_unigene4572 uagpf v2.0 1322
• AutoFact: Ureidoglycine aminohydrolase n=5 Tax=Brassicaceae RepID=Q8GXV5_ARATH 0.0
• FL-Next: tr=mRNA, clone: RTFL01-03-G21; Thellungiella halophila (Salt cress). 0.0
• Blast2go: ureidoglycine aminohydrolase 0.0
C-terminus
uagpf_v2_unigene4722 uagpf v2.0 446
• AutoFact: RecName: Full=FACT complex subunit SSRP1; AltName: Full=Facilitates chromatin transcription complex subunit SSRP1; AltName: Full=Recombination signal sequence recognition protein 1 emb|CAA66480.1| transcription factor [Vicia faba var. minor] 0.0
• FL-Next: sp=FACT complex subunit SSRP1-B; Oryza sativa subsp. japonica (Rice). 0.0
• Blast2go: fact complex subunit ssrp1 0.0
Internal
uagpf_v2_unigene4803 uagpf v2.0 848
• AutoFact: PREDICTED: similar to DNA gyrase subunit A, chloroplastic/mitochondrial n=1 Tax=Vitis vinifera RepID=UPI0001985B62 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: dna gyrase subunit a 0.0
C-terminus
uagpf_v2_unigene4819 uagpf v2.0 940
• AutoFact: putative AP2/EREBP transcription factor [Arabidopsis thaliana] 2.0e-16
• FL-Next: tr=DREB protein; Taxus cuspidata (Japanese yew). 0.0
• Blast2go: ap2 erf domain-containing transcription factor 8.11769e-19
N-terminus
uagpf_v2_unigene4847 uagpf v2.0 638
• AutoFact: RecName: Full=Putative transcription elongation factor SPT5 homolog 1 emb|CAB52557.1| putative protein [Arabidopsis thaliana] emb|CAB77960.1| putative protein [Arabidopsis thaliana] 0.0
• FL-Next: sp=Putative transcription elongation factor SPT5 homolog 1; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Blast2go: global transcription factor group 0.0
Internal
uagpf_v2_unigene4879 uagpf v2.0 579
• AutoFact: DNA-binding protein (Fragment) n=1 Tax=Catharanthus roseus RepID=A1DR78_CATRO 2.0e-30
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: hdzip i protein 0.0
Putative C-terminus
uagpf_v2_unigene4946 uagpf v2.0 624
• AutoFact: pfam07777, MFMR, G-box binding protein MFMR 0.0
• Blast2go: transcription factor hbp-1a 0.0
unknown
uagpf_v2_unigene5221 uagpf v2.0 450
• AutoFact: putative DNA-binding protein [Arabidopsis thaliana] emb|CAB77810.1| putative DNA-binding protein [Arabidopsis thaliana] emb|CAD29664.1| homeodomain protein 14 [Arabidopsis thaliana] gb|ABH04479.1| At4g03250 [Arabidopsis thaliana] 3.0e-33
• Blast2go: homeobox-leucine zipper family protein 0.0
unknown
uagpf_v2_unigene5222 uagpf v2.0 753
• AutoFact: zinc finger CCCH domain-containing protein 20 [Arabidopsis thaliana] sp|O82199.1|C3H20_ARATH RecName: Full=Zinc finger CCCH domain-containing protein 20; Short=AtC3H20 gb|AAC62135.1| putative CCCH-type zinc finger protein [Arabidopsis thaliana] gb|AAM6084 0.0
• Blast2go: ccch-type zinc finger protein 0.0
unknown

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain