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Assembly Name: uagpf v2.0

Name: sequence-specific DNA binding transcription factor activity

Term: GO:0003700  Help

Source: GO from Blast2go

Ontology: Molecular Function

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
uagpf_v2_unigene44365 uagpf v2.0 264
• AutoFact: zinc carboxy peptidase [Brachypodium sylvaticum] 0.0
• FL-Next: tr=Predicted protein; Hordeum vulgare var. distichum (Two-rowed barley). 0.0
• Blast2go: carboxypeptidase d 0.0
Internal
uagpf_v2_unigene44399 uagpf v2.0 314
• AutoFact: DUF547 domain containing protein 1.0e-14
• Blast2go: ternary complex factor mip1-like 0.0
Putative coding
uagpf_v2_unigene44437 uagpf v2.0 372
• AutoFact: Type I MADS-box transcription factor n=1 Tax=Cryptomeria japonica RepID=B2ZX88_CRYJA 7.0e-33
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: mads-box domain-containing protein 1.4013e-45
N-terminus
uagpf_v2_unigene45189 uagpf v2.0 285
• AutoFact: putative DNA-binding protein [Arabidopsis thaliana] emb|CAB77810.1| putative DNA-binding protein [Arabidopsis thaliana] emb|CAD29664.1| homeodomain protein 14 [Arabidopsis thaliana] gb|ABH04479.1| At4g03250 [Arabidopsis thaliana] 3.0e-33
• Blast2go: homeobox-leucine zipper family protein 0.0
Coding
uagpf_v2_unigene45406 uagpf v2.0 378
• AutoFact: transcription factor TCP9 [Arabidopsis thaliana] sp|O64647.1|TCP9_ARATH RecName: Full=Transcription factor TCP9 gb|AAK43925.1|AF370606_1 putative PCF2-like DNA binding protein [Arabidopsis thaliana] gb|AAC06168.1| putative PCF2-like DNA binding protein [A 1.0e-31
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: transcription factor tcp9-like 1.85e-39
Putative N-terminus
uagpf_v2_unigene45637 uagpf v2.0 380
• AutoFact: Transcription factor, putative n=1 Tax=Ricinus communis RepID=B9SR79_RICCO 1.0e-30
• Blast2go: kanadi like transcription factor 6.16344e-36
Coding
uagpf_v2_unigene45647 uagpf v2.0 430
• AutoFact: WRKY7-superfamily of TFs having WRKY and zinc finger domains n=1 Tax=Zea mays RepID=B6T167_MAIZE 6.0e-28
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: wrky7 - superfamily of tfs having wrky and zinc finger domains 1.08841e-33
Putative Complete
uagpf_v2_unigene45710 uagpf v2.0 219
• AutoFact: class II KNOX homeobox transcription factor [Medicago truncatula] 0.0
• Blast2go: homeobox protein knotted-1-like 3-like 0.0
Coding
uagpf_v2_unigene46261 uagpf v2.0 364
• AutoFact: Whole genome shotgun sequence of line PN40024, scaffold_4.assembly12x (Fragment) n=2 Tax=Vitis vinifera RepID=D7SJG4_VITVI 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: abc transporter family of the mitochondria family 0.0
Internal
uagpf_v2_unigene46371 uagpf v2.0 395
• AutoFact: putative CCAAT-binding transcription factor [Oryza sativa Japonica Group] 1.0e-39
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: nuclear transcription factor y subunit a-9-like 0.0
Internal
uagpf_v2_unigene46385 uagpf v2.0 263
• AutoFact: NAD(P)-linked oxidoreductase-like protein [Arabidopsis thaliana] gb|AAL08296.1| At1g60710/F8A5_23 [Arabidopsis thaliana] gb|AAM20506.1| auxin-induced protein, putative [Arabidopsis thaliana] gb|AAN15570.1| auxin-induced protein, putative [Arabidopsis thal 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: nad -linked oxidoreductase-like protein 0.0
N-terminus
uagpf_v2_unigene46440 uagpf v2.0 411
• AutoFact: Nuclear transcription factor Y subunit C-2 n=2 Tax=Arabidopsis RepID=NFYC2_ARATH 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: nuclear transcription factor y subunit c-2 0.0
N-terminus
uagpf_v2_unigene46507 uagpf v2.0 337
• AutoFact: Tubby-like protein n=1 Tax=Physcomitrella patens subsp. patens RepID=A9SPK2_PHYPA 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: tubby-like f-box protein 3 0.0
Internal
uagpf_v2_unigene46528 uagpf v2.0 337
• AutoFact: Ethylene-insensitive 3d n=2 Tax=Populus trichocarpa RepID=B9HK87_POPTR 6.0e-38
• FL-Next: sp=Protein ETHYLENE INSENSITIVE 3; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Blast2go: protein ethylene insensitive 3-like 4.2039e-45
Internal
uagpf_v2_unigene47165 uagpf v2.0 215
• AutoFact: DNA topoisomerase 2 (Fragment) n=1 Tax=Vitis vinifera RepID=D7T341_VITVI 0.0
• FL-Next: sp=DNA topoisomerase 2; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Blast2go: dna topoisomerase ii 0.0
Internal
uagpf_v2_unigene47619 uagpf v2.0 236
• AutoFact: pfam00249, Myb_DNA-binding, Myb-like DNA-binding domain 7.0e-05
• Blast2go: tsl-kinase interacting protein 1 0.0
unknown
uagpf_v2_unigene47729 uagpf v2.0 402
• AutoFact: AP2 domain containing protein 3.0e-13
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: dre binding factor 2 2.27499e-33
N-terminus
uagpf_v2_unigene48082 uagpf v2.0 278
• AutoFact: Transcription factor, putative n=1 Tax=Ricinus communis RepID=B9RHR8_RICCO 0.0
• FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
• Blast2go: enhancer of polycomb-like protein 0.0
Internal
uagpf_v2_unigene48414 uagpf v2.0 157
• AutoFact: Transcription factor, putative n=1 Tax=Ricinus communis RepID=B9RF92_RICCO 2.0e-12
• Blast2go: zf-4cxxc-r1 transcription factor and jumonji domain-containing protein 3.96148e-14
unknown
uagpf_v2_unigene48838 uagpf v2.0 259
• AutoFact: Homeobox 1 n=1 Tax=Picea abies RepID=Q9FR59_PICAB 0.0
• FL-Next: tr=Homeobox 1; Picea abies (Norway spruce) (Picea excelsa). 0.0
• Blast2go: homeobox-leucine zipper protein hdg2-like 0.0
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain