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Assembly Name: uagpf v2.0

Name: chloroplast thylakoid membrane

Term: GO:0009535  Help

Source: GO from Blast2go

Ontology: Cellular Component


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
uagpf_v2_unigene3662 uagpf v2.0 1082
AutoFact: chloroplast thylakoid lumen protein [Arabidopsis thaliana] sp|O22773.3|TL16_ARATH RecName: Full=Thylakoid lumenal 16.5 kDa protein, chloroplastic; Flags: Precursor gb|AAK63989.1| AT4g02530/T10P11_17 [Arabidopsis thaliana] gb|AAL87390.1| AT4g02530/T10P11_1 3.0e-34
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: chloroplast thylakoid lumen protein 0.0
Complete
uagpf_v2_unigene3883 uagpf v2.0 551
AutoFact: Ankyrin repeat domain protein, putative n=1 Tax=Ricinus communis RepID=B9RF69_RICCO 0.0
FL-Next: sp=Probable signal recognition particle 43 kDa protein, chloroplastic; Oryza sativa subsp. japonica (Rice). 0.0
Blast2go: ankyrin repeat domain 0.0
C-terminus
uagpf_v2_unigene3991 uagpf v2.0 562
AutoFact: chlorophyll synthase [Arabidopsis thaliana] sp|Q38833.1|CHLG_ARATH RecName: Full=Chlorophyll synthase, chloroplastic; AltName: Full=Polyprenyl transferase; AltName: Full=Protein G4; Short=AtG4; Flags: Precursor gb|AAA96740.1| putative chlorophyll syntheta 0.0
Blast2go: chlorophyll synthase 0.0
unknown
uagpf_v2_unigene4084 uagpf v2.0 1088
AutoFact: Transcription factor, putative n=1 Tax=Ricinus communis RepID=B9SEE4_RICCO 0.0
FL-Next: tr=Transcription factor, putative; Ricinus communis (Castor bean). 0.0
Blast2go: lil3 protein 0.0
Complete
uagpf_v2_unigene4374 uagpf v2.0 418
AutoFact: Caldesmon multi-domain protein 2.0e-09
Blast2go: uncharacterized protein 0.0
unknown
uagpf_v2_unigene4583 uagpf v2.0 373
AutoFact: Protease Do-like 2, chloroplastic n=4 Tax=Arabidopsis RepID=DEGP2_ARATH 2.0e-28
Blast2go: protease do-like chloroplastic-like 0.0
unknown
uagpf_v2_unigene4709 uagpf v2.0 653
AutoFact: Ankyrin repeat domain protein, putative n=1 Tax=Ricinus communis RepID=B9RF69_RICCO 0.0
Blast2go: ankyrin repeat domain 0.0
unknown
uagpf_v2_unigene4914 uagpf v2.0 492
AutoFact: heme-binding-like protein [Arabidopsis thaliana] sp|Q9SR77.1|HBPL1_ARATH RecName: Full=Heme-binding-like protein At3g10130, chloroplastic; Flags: Precursor gb|AAF04411.1|AC010927_4 unknown protein [Arabidopsis thaliana] gb|AAW38980.1| At3g10130 [Arabidops 0.0
FL-Next: sp=Heme-binding-like protein At3g10130, chloroplastic; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: heme-binding-like protein chloroplastic-like 0.0
C-terminus
uagpf_v2_unigene4981 uagpf v2.0 666
AutoFact: chloroplast Hcf106-1 [Physcomitrella patens] 9.0e-36
Blast2go: protein 0.0
unknown
uagpf_v2_unigene5011 uagpf v2.0 1198
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
Complete
uagpf_v2_unigene5147 uagpf v2.0 590
AutoFact: pentatricopeptide repeat-containing protein [Arabidopsis thaliana] sp|Q9ZUU3.1|PP190_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g37230 gb|AAC98044.1| unknown protein [Arabidopsis thaliana] gb|AAO64144.1| unknown protein [Arabidopsi 0.0
FL-Next: sp=Pentatricopeptide repeat-containing protein At2g37230; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: pentatricopeptide repeat-containing protein 0.0
C-terminus
uagpf_v2_unigene5168 uagpf v2.0 1009
AutoFact: stress enhanced protein 2 [Arabidopsis thaliana] gb|AAF61626.1|AF133717_1 stress enhanced protein 2 [Arabidopsis thaliana] gb|AAD20414.1| expressed protein [Arabidopsis thaliana] gb|AAM60969.1| unknown [Arabidopsis thaliana] gb|AEC07247.1| stress enhanced 4.0e-24
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: stress enhanced protein 2 0.0
Complete
uagpf_v2_unigene5347 uagpf v2.0 685
AutoFact: TATC-like protein [imported] - Arabidopsis thaliana 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: sec-independent protein translocase protein 0.0
C-terminus
uagpf_v2_unigene5375 uagpf v2.0 1031
AutoFact: ribosomal protein-like protein [Arabidopsis thaliana] gb|AAQ65116.1| At1g16790 [Arabidopsis thaliana] dbj|BAD42938.1| unknown protein [Arabidopsis thaliana] gb|AEE29497.1| ribosomal protein-like protein [Arabidopsis thaliana] 2.0e-13
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: ribosomal protein 0.0
Complete
uagpf_v2_unigene5460 uagpf v2.0 877
AutoFact: Putative rubredoxin n=1 Tax=Musa acuminata RepID=Q0GBX1_MUSAC 9.0e-30
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
C-terminus
uagpf_v2_unigene5544 uagpf v2.0 554
AutoFact: cofactor assembly, complex C (B6F) [Arabidopsis thaliana] gb|AAM12992.1| putative protein [Arabidopsis thaliana] gb|AAM47922.1| putative protein [Arabidopsis thaliana] dbj|BAD94460.1| hypothetical protein [Arabidopsis thaliana] gb|AED94046.1| cofactor ass 8.0e-33
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
C-terminus
uagpf_v2_unigene5752 uagpf v2.0 588
AutoFact: [R] COG0724 RNA-binding proteins (RRM domain) 5.0e-18
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: rna recognition motif-containing protein 0.0
C-terminus
uagpf_v2_unigene5822 uagpf v2.0 423
AutoFact: thylakoid rhodanese-like protein [Arabidopsis thaliana] sp|Q9M158.2|Y4105_ARATH RecName: Full=Uncharacterized protein At4g01050, chloroplastic; Flags: Precursor gb|AAL09804.1| AT4g01050/F2N1_31 [Arabidopsis thaliana] gb|AAL15331.1| AT4g01050/F2N1_31 [Arab 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: at4g01050 f2n1_31 0.0
N-terminus
uagpf_v2_unigene5850 uagpf v2.0 475
AutoFact: Mitochondrial respiratory chain complexes assembly protein AFG3, putative (EC:3.6.4.3); K08956 AFG3 family protein [EC:3.4.24.-] 0.0
FL-Next: sp=ATP-dependent zinc metalloprotease FTSH 8, mitochondrial; Oryza sativa subsp. japonica (Rice). 0.0
Blast2go: protein 0.0
Internal
uagpf_v2_unigene5910 uagpf v2.0 571
AutoFact: 30S ribosomal protein S5, putative n=1 Tax=Ricinus communis RepID=B9RBC3_RICCO 1.96182e-44
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: 30s ribosomal protein s5 0.0
N-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain