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Assembly Name: uagpf v2.0

Name: nucleus

Term: GO:0005634  Help

Source: GO from Blast2go

Ontology: Cellular Component


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
uagpf_v2_unigene54276 uagpf v2.0 383
AutoFact: Cyclin-dependent kinases regulatory subunit 1 n=7 Tax=core eudicotyledons RepID=CKS1_ARATH 4.0e-32
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: cyclin-dependent kinases regulatory subunit 0.0
N-terminus
uagpf_v2_unigene54300 uagpf v2.0 369
AutoFact: transcription factor DcMYB2 [Daucus carota] 0.0
Blast2go: myb transcription factor 0.0
unknown
uagpf_v2_unigene54340 uagpf v2.0 252
AutoFact: AUX/IAA protein n=4 Tax=Solanum RepID=Q45UB0_SOLLC 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: aux iaa protein 0.0
Putative C-terminus
uagpf_v2_unigene54401 uagpf v2.0 240
AutoFact: protein-tyrosine-phosphatase IBR5 [Arabidopsis thaliana] sp|Q84JU4.1|IBR5_ARATH RecName: Full=Protein-tyrosine-phosphatase IBR5; AltName: Full=Protein INDOLE-3-BUTYRIC ACID RESPONSE 5; Short=Protein IBA RESPONSE 5; AltName: Full=SKP1-interacting partner 3 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein-tyrosine-phosphatase ibr5 0.0
C-terminus
uagpf_v2_unigene54469 uagpf v2.0 592
AutoFact: actin-related protein 7 [Arabidopsis thaliana] sp|Q8L4Y5.1|ARP7_ARATH RecName: Full=Actin-related protein 7 gb|AAM53247.1|AF507915_1 actin-related protein 7 [Arabidopsis thaliana] gb|AAM20512.1| actin -like protein [Arabidopsis thaliana] tpg|DAA00028.1| T 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: actin related protein 0.0
C-terminus
uagpf_v2_unigene54479 uagpf v2.0 672
AutoFact: DELLA domain GRAS family transcription factor rga-like protein n=2 Tax=Populus trichocarpa RepID=B9GV61_POPTR 0.0
FL-Next: sp=DELLA protein GAI1; Vitis vinifera (Grape). 0.0
Blast2go: della protein 0.0
C-terminus
uagpf_v2_unigene54503 uagpf v2.0 236
AutoFact: small ubiquitin-related modifier 2 [Arabidopsis thaliana] sp|Q9FLP6.1|SUMO2_ARATH RecName: Full=Small ubiquitin-related modifier 2; Short=AtSUMO2 dbj|BAB08585.1| ubiquitin-like protein SMT3-like [Arabidopsis thaliana] gb|AAL91628.1| AT5g55160/MCO15_11 [Ar 2.0e-40
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: ubiquitin-like protein smt3 0.0
Putative C-terminus
uagpf_v2_unigene54510 uagpf v2.0 468
AutoFact: putative poly (ADP-ribose) polymerase [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: poly 0.0
C-terminus
uagpf_v2_unigene54528 uagpf v2.0 464
AutoFact: PASTICCINO 2 n=1 Tax=Brassica rapa subsp. pekinensis RepID=B2MWR3_BRARP 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: 3-hydroxyacyl- dehydratase pasticcino 2 0.0
N-terminus
uagpf_v2_unigene54641 uagpf v2.0 654
AutoFact: Thioredoxin-like protein 4A n=56 Tax=Coelomata RepID=TXN4A_HUMAN 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: thioredoxin-like 4a 0.0
Complete
uagpf_v2_unigene54661 uagpf v2.0 647
AutoFact: Aspartate aminotransferase n=1 Tax=Picea sitchensis RepID=A9NUJ0_PICSI 0.0
FL-Next: sp=Aspartate aminotransferase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: aspartate aminotransferase 0.0
N-terminus
uagpf_v2_unigene54689 uagpf v2.0 591
AutoFact: AP2 domain containing protein 3.0e-13
Blast2go: dre binding factor 2 2.27499e-33
Coding
uagpf_v2_unigene54703 uagpf v2.0 296
AutoFact: mago nashi [Taiwania cryptomerioides] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: mago nashi 0.0
Putative N-terminus
uagpf_v2_unigene54708 uagpf v2.0 362
AutoFact: U2 snrnp auxiliary factor, small subunit, putative n=1 Tax=Ricinus communis RepID=B9SRG2_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: u2 snrnp auxiliary small 0.0
C-terminus
uagpf_v2_unigene54841 uagpf v2.0 506
AutoFact: Aspartate aminotransferase n=1 Tax=Picea sitchensis RepID=A9NUJ0_PICSI 0.0
FL-Next: sp=Aspartate aminotransferase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: aspartate aminotransferase 0.0
Internal
uagpf_v2_unigene54975 uagpf v2.0 615
AutoFact: nuclear factor Y, subunit C11 [Arabidopsis thaliana] gb|AAL58929.1|AF462841_1 At3g12480/MQC3.32 [Arabidopsis thaliana] dbj|BAB03155.1| unnamed protein product [Arabidopsis thaliana] gb|AAN28786.1| At3g12480/MQC3.32 [Arabidopsis thaliana] gb|AEE75200.1| nu 4.00001e-41
Blast2go: protein 0.0
Coding
uagpf_v2_unigene55077 uagpf v2.0 368
AutoFact: actin-related protein 7 [Arabidopsis thaliana] sp|Q8L4Y5.1|ARP7_ARATH RecName: Full=Actin-related protein 7 gb|AAM53247.1|AF507915_1 actin-related protein 7 [Arabidopsis thaliana] gb|AAM20512.1| actin -like protein [Arabidopsis thaliana] tpg|DAA00028.1| T 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: actin related protein 0.0
C-terminus
uagpf_v2_unigene55085 uagpf v2.0 347
AutoFact: zinc finger (MYND type) family protein / F-box family protein [Arabidopsis thaliana] sp|Q9FYF9.1|FB76_ARATH RecName: Full=F-box protein At1g67340 gb|AAG00241.1|AC002130_6 F1N21.16 [Arabidopsis thaliana] gb|AAL14418.1| At1g67340/F1N21_16 [Arabidopsis thali 0.0
Blast2go: f-box protein at1g67340-like 0.0
unknown
uagpf_v2_unigene55133 uagpf v2.0 349
AutoFact: Endosomal P24A protein, putative n=1 Tax=Ricinus communis RepID=B9STR3_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: endosomal p24a protein 0.0
C-terminus
uagpf_v2_unigene55174 uagpf v2.0 337
AutoFact: pfam08839, CDT1, DNA replication factor CDT1 like 1.0e-28
FL-Next: sp=CDT1-like protein b; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: cdt1-like protein chloroplastic-like 7.66257e-39
Putative N-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain