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Assembly Name: uagpf v2.0

Name: nucleus

Term: GO:0005634  Help

Source: GO from Blast2go

Ontology: Cellular Component

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
uagpf_v2_unigene53360 uagpf v2.0 450
• AutoFact: DNA damage-inducible protein 1 [Arabidopsis thaliana] ref|NP_001189877.1| DNA damage-inducible protein 1 [Arabidopsis thaliana] gb|ABG25069.1| At3g13235 [Arabidopsis thaliana] dbj|BAE98897.1| hypothetical protein [Arabidopsis thaliana] gb|AEE75323.1| DNA 0.0
• Blast2go: dna damage-inducible protein 1 0.0
unknown
uagpf_v2_unigene53379 uagpf v2.0 474
• AutoFact: RNA recognition motif and CCHC-type zinc finger domain-containing protein [Arabidopsis thaliana] gb|AAL11606.1|AF424613_1 AT3g26420/F20C19_14 [Arabidopsis thaliana] dbj|BAB02203.1| unnamed protein product [Arabidopsis thaliana] gb|AAK96804.1| Unknown prot 7.0e-35
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: rna recognition motif family expressed 0.0
N-terminus
uagpf_v2_unigene53389 uagpf v2.0 237
• AutoFact: 26S proteasome non-ATPase regulatory subunit 14 n=21 Tax=Embryophyta RepID=PSDE_ARATH 0.0
• Blast2go: 26s proteasome non-atpase regulatory subunit 14 0.0
unknown
uagpf_v2_unigene53393 uagpf v2.0 324
• AutoFact: kinesin 1 [Arabidopsis thaliana] sp|Q07970.1|ATK1_ARATH RecName: Full=Kinesin-1; AltName: Full=Kinesin-like protein A dbj|BAA01972.1| kinesin-like motor protein heavy chain [Arabidopsis thaliana] emb|CAA17546.1| kinesin-related protein katA [Arabidopsis t 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: protein 0.0
Internal
uagpf_v2_unigene53412 uagpf v2.0 420
• AutoFact: RING/FYVE/PHD zinc finger-containing protein [Arabidopsis thaliana] dbj|BAB03019.1| unnamed protein product [Arabidopsis thaliana] gb|AAM67115.1| PHD-finger protein, putative [Arabidopsis thaliana] gb|ABD94083.1| At3g24010 [Arabidopsis thaliana] dbj|BAH30 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: phd-finger protein 0.0
C-terminus
uagpf_v2_unigene53423 uagpf v2.0 380
• AutoFact: Phytochrome-associated serine/threonine protein phosphatase 3 n=13 Tax=Embryophyta RepID=FYPP3_ARATH 0.0
• FL-Next: sp=Serine/threonine-protein phosphatase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: phosphoprotein phosphatase 0.0
Putative C-terminus
uagpf_v2_unigene53571 uagpf v2.0 271
• AutoFact: Mitotic-spindle organizing protein 1 n=1 Tax=Picea sitchensis RepID=MZT1_PICSI 2.0e-29
• Blast2go: protein 3.02401e-37
Putative coding
uagpf_v2_unigene53587 uagpf v2.0 235
• AutoFact: Calcium-binding protein n=1 Tax=Lotus japonicus RepID=Q9SCA1_LOTJA 2.0e-38
• Blast2go: calcium-binding protein 0.0
unknown
uagpf_v2_unigene53597 uagpf v2.0 427
• AutoFact: Protein arginine n-methyltransferase, putative n=1 Tax=Ricinus communis RepID=B9RT51_RICCO 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: histone-arginine methyltransferase carm1 0.0
C-terminus
uagpf_v2_unigene53607 uagpf v2.0 602
• AutoFact: putative DnaJ protein [Camellia sinensis] 6.0e-28
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: heat shock protein binding protein 0.0
C-terminus
uagpf_v2_unigene53637 uagpf v2.0 304
• AutoFact: small ubiquitin-related modifier 2 [Arabidopsis thaliana] sp|Q9FLP6.1|SUMO2_ARATH RecName: Full=Small ubiquitin-related modifier 2; Short=AtSUMO2 dbj|BAB08585.1| ubiquitin-like protein SMT3-like [Arabidopsis thaliana] gb|AAL91628.1| AT5g55160/MCO15_11 [Ar 2.0e-18
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: ubiquitin-like protein smt3 1.12748e-23
C-terminus
uagpf_v2_unigene53655 uagpf v2.0 437
• AutoFact: Glycolate oxidase n=1 Tax=Zantedeschia aethiopica RepID=Q84LB8_ZANAE 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: glycolate oxidase 0.0
C-terminus
uagpf_v2_unigene53671 uagpf v2.0 210
• AutoFact: 60S acidic ribosomal protein P3-1 n=2 Tax=Arabidopsis RepID=RLA31_ARATH 5.0e-11
• Blast2go: 60s acidic ribosomal protein p3 1.32677e-21
unknown
uagpf_v2_unigene53691 uagpf v2.0 483
• AutoFact: LOB domain-containing protein, putative n=1 Tax=Ricinus communis RepID=B9S4B8_RICCO 1.4013e-45
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: lob domain-containing protein 0.0
N-terminus
uagpf_v2_unigene53735 uagpf v2.0 651
• AutoFact: RNA recognition motif-containing protein [Arabidopsis thaliana] ref|NP_974317.1| RNA recognition motif-containing protein [Arabidopsis thaliana] dbj|BAA97064.1| unnamed protein product [Arabidopsis thaliana] gb|AAL36202.1| putative RNA-binding protein [Ar 7.00649e-44
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: rna recognition motif-containing protein 0.0
Internal
uagpf_v2_unigene53746 uagpf v2.0 450
• AutoFact: Serine/threonine-protein phosphatase n=1 Tax=Picea sitchensis RepID=A9NUQ6_PICSI 0.0
• FL-Next: sp=Serine/threonine-protein phosphatase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: serine threonine-protein phosphatase 7 0.0
C-terminus
uagpf_v2_unigene53776 uagpf v2.0 448
• AutoFact: serine/threonine-protein kinase AtPK1/AtPK6 [Arabidopsis thaliana] sp|P42818.1|KPK1_ARATH RecName: Full=Serine/threonine-protein kinase AtPK1/AtPK6; AltName: Full=Ribosomal-protein S6 kinase homolog 1 gb|AAG51351.1|AC012562_12 putative ribosomal-protein S 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: serine threonine protein kinase 2 0.0
Putative N-terminus
uagpf_v2_unigene53780 uagpf v2.0 434
• AutoFact: Unassigned protein
• FL-Next: tr=Putative uncharacterized protein; Zea mays (Maize). 0.0
• Blast2go: uncharacterized protein 9.15812e-15
Putative N-terminus
uagpf_v2_unigene53805 uagpf v2.0 345
• AutoFact: RNA recognition motif-containing protein [Arabidopsis thaliana] ref|NP_849832.1| RNA recognition motif-containing protein [Arabidopsis thaliana] gb|AAB71977.1| putative RNA-binding protein [Arabidopsis thaliana] gb|AAM65738.1| RNA binding protein, putativ 3.0e-33
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: rna recognition motif-containing protein 0.0
N-terminus
uagpf_v2_unigene53821 uagpf v2.0 318
• AutoFact: Calcium-binding protein n=1 Tax=Lotus japonicus RepID=Q9SCA1_LOTJA 2.0e-38
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: calcium-binding protein 0.0
C-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain