Sustainpine_db
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Assembly Name: uagpf v2.0

Name: nucleus

Term: GO:0005634  Help

Source: GO from Blast2go

Ontology: Cellular Component


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
uagpf_v2_unigene52702 uagpf v2.0 429
AutoFact: transcription factor (E2F) [Chenopodium rubrum] 0.0
Blast2go: transcription factor e2f 0.0
unknown
uagpf_v2_unigene52756 uagpf v2.0 271
AutoFact: putative Der1-like family protein [Cynodon dactylon] 0.0
FL-Next: sp=Derlin-1; Oryza sativa subsp. japonica (Rice). 0.0
Blast2go: derlin- -like 0.0
C-terminus
uagpf_v2_unigene52774 uagpf v2.0 608
AutoFact: Glutamate decarboxylase n=2 Tax=Pinaceae RepID=A0EJ89_PINPS 0.0
FL-Next: tr=Glutamate decarboxylase; Pinus pinaster (Maritime pine). 0.0
Blast2go: glutamate decarboxylase 0.0
N-terminus
uagpf_v2_unigene52836 uagpf v2.0 109
AutoFact: EMB514 n=2 Tax=Arabidopsis RepID=Q8L557_ARATH 5.99994e-41
Blast2go: protein 0.0
unknown
uagpf_v2_unigene52886 uagpf v2.0 405
AutoFact: Arf gtpase-activating protein, putative n=1 Tax=Ricinus communis RepID=B9SP31_RICCO 0.0
FL-Next: sp=ADP-ribosylation factor GTPase-activating protein AGD7; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: adp-ribosylation factor gtpase-activating protein agd6 0.0
Internal
uagpf_v2_unigene52896 uagpf v2.0 382
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein Sb01g039080; Sorghum bicolor (Sorghum) (Sorghum vulgare). 0.0
Blast2go: protein 0.0
C-terminus
uagpf_v2_unigene52904 uagpf v2.0 340
AutoFact: nodulin-like protein [Citrus trifoliata] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: uncharacterized membrane protein ymr155w-like 0.0
Internal
uagpf_v2_unigene52983 uagpf v2.0 596
AutoFact: Excision repair cross-complementing 1 ercc1, putative n=1 Tax=Ricinus communis RepID=B9RF25_RICCO 0.0
Blast2go: dna excision repair protein ercc-1 0.0
unknown
uagpf_v2_unigene53036 uagpf v2.0 406
AutoFact: complex II (EC:1.3.5.1) 1.0e-09
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: succinate dehydrogenase 5 1.6212e-19
Putative Complete
uagpf_v2_unigene53053 uagpf v2.0 327
AutoFact: Putative methyl-binding domain protein n=1 Tax=Cryptomeria japonica RepID=Q1XG62_CRYJA 9.94922e-44
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: methyl-binding domain protein 0.0
C-terminus
uagpf_v2_unigene53069 uagpf v2.0 239
AutoFact: Chaperone protein dnaJ 11, chloroplast, putative n=1 Tax=Ricinus communis RepID=B9R8A2_RICCO 3.0e-19
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
Putative N-terminus
uagpf_v2_unigene53073 uagpf v2.0 379
AutoFact: Putative wuschel homeobox protein WOX8/9 n=1 Tax=Picea abies RepID=D5LMH9_PICAB 2.0e-24
FL-Next: tr=Putative wuschel homeobox protein WOX8/9; Picea abies (Norway spruce) (Picea excelsa). 0.0
Blast2go: protein 2.55089e-28
Putative C-terminus
uagpf_v2_unigene53135 uagpf v2.0 430
AutoFact: Similarity to ribonuclease III n=1 Tax=Cryptomeria japonica RepID=Q1XG54_CRYJA 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: ribonuclease iii 0.0
N-terminus
uagpf_v2_unigene53222 uagpf v2.0 518
AutoFact: ssDNA-binding transcriptional regulator [Arabidopsis thaliana] gb|AAF43941.1|AC012188_18 Contains similarity to a hypothetical protein from Arabidopsis thaliana gb|AC002521.2. EST gb|AI995686 comes from this gene gb|AAG48815.1|AF332452_1 putative DNA-bind 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: ssdna-binding transcriptional regulator 0.0
C-terminus
uagpf_v2_unigene53239 uagpf v2.0 645
AutoFact: Dead box ATP-dependent RNA helicase, putative n=1 Tax=Ricinus communis RepID=B9T0X5_RICCO 0.0
Blast2go: dead-box atp-dependent rna helicase 29-like 0.0
Putative coding
uagpf_v2_unigene53261 uagpf v2.0 527
AutoFact: AP2/ERF domain-containing transcription factor n=1 Tax=Populus trichocarpa RepID=A9PLA3_POPTR 4.0e-31
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: ap2 erf domain-containing transcription factor 0.0
Putative Complete
uagpf_v2_unigene53275 uagpf v2.0 447
AutoFact: Nucleoside diphosphate kinase n=1 Tax=Ricinus communis RepID=B9RAM1_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: nucleoside diphosphate kinase 0.0
C-terminus
uagpf_v2_unigene53292 uagpf v2.0 356
AutoFact: Ethylene-responsive element binding factor-like protein (Fragment) n=3 Tax=Picea sitchensis RepID=E0ZDA4_PICSI 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: ethylene-responsive element binding factor-like protein 0.0
N-terminus
uagpf_v2_unigene53307 uagpf v2.0 589
AutoFact: RAD23 n=2 Tax=Pinaceae RepID=B5M6R6_PINSY 0.0
FL-Next: tr=RAD23; Pinus sylvestris var. mongolica. 0.0
Blast2go: protein 0.0
Internal
uagpf_v2_unigene53333 uagpf v2.0 476
AutoFact: RNA recognition motif-containing protein [Arabidopsis thaliana] ref|NP_974317.1| RNA recognition motif-containing protein [Arabidopsis thaliana] dbj|BAA97064.1| unnamed protein product [Arabidopsis thaliana] gb|AAL36202.1| putative RNA-binding protein [Ar 2.0e-27
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: rna recognition motif-containing protein 0.0
N-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain