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Assembly Name: uagpf v2.0

Name: nucleus

Term: GO:0005634  Help

Source: GO from Blast2go

Ontology: Cellular Component


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
uagpf_v2_unigene52279 uagpf v2.0 423
AutoFact: Histone deacetylase (Fragment) n=2 Tax=Vitis vinifera RepID=D7TSU0_VITVI 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: histone deacetylase 0.0
Putative Complete
uagpf_v2_unigene52306 uagpf v2.0 444
AutoFact: DRE-binding protein DREB1 n=1 Tax=Cymbidium insigne RepID=A6YT27_9ASPA 1.0e-32
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: dre-binding protein dreb1 0.0
Internal
uagpf_v2_unigene52331 uagpf v2.0 487
AutoFact: Transcription Factor IIF, Rap30/Rap74, interaction [Medicago truncatula] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
N-terminus
uagpf_v2_unigene52340 uagpf v2.0 487
AutoFact: Zinc finger, FYVE/PHD-type [Medicago truncatula] 0.0
Blast2go: phd finger protein 0.0
unknown
uagpf_v2_unigene52367 uagpf v2.0 325
AutoFact: Beta-amylase n=1 Tax=Picea sitchensis RepID=A9NVE4_PICSI 0.0
FL-Next: sp=Beta-amylase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: beta-amylase chloroplastic-like 0.0
Internal
uagpf_v2_unigene52379 uagpf v2.0 262
AutoFact: putative CCR4-associated factor 1-7 [Arabidopsis thaliana] sp|Q9SKZ2.2|CAF1G_ARATH RecName: Full=Probable CCR4-associated factor 1 homolog 7 gb|AAK93623.1| putative CCR4-associated factor [Arabidopsis thaliana] gb|AAD15397.2| putative CCR4-associated fact 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: ccr4-associated factor 0.0
C-terminus
uagpf_v2_unigene52383 uagpf v2.0 291
AutoFact: protein alfin-like 3 [Arabidopsis thaliana] emb|CAB87196.1| nucleic acid binding protein-like [Arabidopsis thaliana] gb|AAL32929.1| nucleic acid binding protein-like [Arabidopsis thaliana] gb|AAM47893.1| nucleic acid binding protein-like [Arabidopsis thal 2.0e-14
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: phd finger family protein 9.92674e-21
N-terminus
uagpf_v2_unigene52414 uagpf v2.0 269
AutoFact: PREDICTED: HIV-1 Vpr binding protein, partial [Bos taurus] 0.0
Blast2go: protein 0.0
Coding
uagpf_v2_unigene52433 uagpf v2.0 444
AutoFact: Similarity to ribonuclease III n=1 Tax=Cryptomeria japonica RepID=Q1XG54_CRYJA 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: ribonuclease iii 0.0
C-terminus
uagpf_v2_unigene52455 uagpf v2.0 399
AutoFact: Histone H2A n=8 Tax=Picea sitchensis RepID=A9P2B3_PICSI 9.0e-26
Blast2go: histone h2a 1.93918e-30
unknown
uagpf_v2_unigene52459 uagpf v2.0 281
AutoFact: mRNA cap guanine-N7 methyltransferase n=1 Tax=Picea sitchensis RepID=C0PS33_PICSI 0.0
Blast2go: mrna cap guanine-n7 methyltransferase 1 0.0
unknown
uagpf_v2_unigene52483 uagpf v2.0 323
AutoFact: phosducin-like protein 3 homolog [Arabidopsis thaliana] gb|AAR24679.1| At3g50960 [Arabidopsis thaliana] dbj|BAF00947.1| hypothetical protein [Arabidopsis thaliana] gb|AEE78732.1| phosducin-like protein 3 homolog [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: thioredoxin domain-containing protein 9 0.0
C-terminus
uagpf_v2_unigene52503 uagpf v2.0 294
AutoFact: DUF1421 multi-domain protein 9.0e-18
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: zinc finger protein 0.0
C-terminus
uagpf_v2_unigene52554 uagpf v2.0 313
AutoFact: CCAAT-box binding factor HAP3 n=3 Tax=Selaginella moellendorffii RepID=D8RRZ5_SELML 0.0
Blast2go: ccaat-box binding factor hap3 0.0
unknown
uagpf_v2_unigene52557 uagpf v2.0 341
AutoFact: putative ABC transporter [Oryza sativa Japonica Group] gb|EEE59750.1| hypothetical protein OsJ_12218 [Oryza sativa Japonica Group] 0.0
FL-Next: sp=Putative ABC1 protein At2g40090; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: abc transporter like protein 0.0
Internal
uagpf_v2_unigene52565 uagpf v2.0 240
AutoFact: putative transcription initiation factor [Oryza sativa Japonica Group] gb|ABB46979.1| mutant TFIIF-alpha, putative, expressed [Oryza sativa Japonica Group] 2.0e-32
FL-Next: Isoform 2 of Transcription initiation factor IIF subunit alpha OS=Arabidopsis thaliana GN=RAP74 0.0
Blast2go: transcription initiation factor iif subunit alpha 7.42688e-44
Internal
uagpf_v2_unigene52573 uagpf v2.0 394
AutoFact: putative methyltransferase PMT3 [Arabidopsis thaliana] ref|NP_001031639.1| putative methyltransferase PMT3 [Arabidopsis thaliana] sp|Q93YV7.1|PMT3_ARATH RecName: Full=Probable methyltransferase PMT3 gb|AAL24095.1| putative ankyrin protein [Arabidopsis tha 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: methyltransferase pmt3 0.0
Internal
uagpf_v2_unigene52589 uagpf v2.0 355
AutoFact: Arf gtpase-activating protein, putative n=1 Tax=Ricinus communis RepID=B9SNV8_RICCO 0.0
Blast2go: probable adp-ribosylation factor gtpase-activating protein agd8-like 0.0
unknown
uagpf_v2_unigene52639 uagpf v2.0 1016
AutoFact: Pyruvate dehydrogenase, putative n=1 Tax=Ricinus communis RepID=B9S2H9_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: pyruvate dehydrogenase e1 alpha subunit 0.0
C-terminus
uagpf_v2_unigene52697 uagpf v2.0 691
AutoFact: pescadillo-like protein [Zinnia violacea] 0.0
FL-Next: tr=Putative uncharacterized protein; Arabidopsis lyrata subsp. lyrata (Lyre-leaved rock-cress). 0.0
Blast2go: pescadillo-like protein 0.0
C-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain