Sustainpine_db
HomeAssembliesBLASTSearchInstitutions

Assembly Name: uagpf v2.0

Name: nucleus

Term: GO:0005634  Help

Source: GO from Blast2go

Ontology: Cellular Component


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
uagpf_v2_unigene51180 uagpf v2.0 581
AutoFact: putative CCR4-associated factor 1-7 [Arabidopsis thaliana] sp|Q9SKZ2.2|CAF1G_ARATH RecName: Full=Probable CCR4-associated factor 1 homolog 7 gb|AAK93623.1| putative CCR4-associated factor [Arabidopsis thaliana] gb|AAD15397.2| putative CCR4-associated fact 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: ccr4-associated factor 0.0
C-terminus
uagpf_v2_unigene51237 uagpf v2.0 461
AutoFact: RecName: Full=50S ribosomal protein L4, chloroplastic; Short=R-protein L4; Flags: Precursor pdb|3BBO|G Chain G, Homology Model For The Spinach Chloroplast 50s Subunit Fitted To 9.4a Cryo-Em Map Of The 70s Chlororibosome emb|CAA75149.1| chloroplast ribosom 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: 50s ribosomal protein l4 0.0
C-terminus
uagpf_v2_unigene51249 uagpf v2.0 700
AutoFact: MYB transcription factor MIXTA-like 2 [Antirrhinum majus] 0.0
Blast2go: myb27 protein 0.0
Coding
uagpf_v2_unigene51279 uagpf v2.0 500
AutoFact: Receptor protein kinase CLAVATA1, putative n=1 Tax=Ricinus communis RepID=B9T173_RICCO 1.0e-19
FL-Next: tr=Clavata-like receptor; Picea glauca (White spruce) (Pinus glauca). 0.0
Blast2go: protein kinase-coding resistance protein 1.50041e-21
Internal
uagpf_v2_unigene51293 uagpf v2.0 384
AutoFact: PASTICCINO 2 n=1 Tax=Brassica rapa subsp. pekinensis RepID=B2MWR3_BRARP 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: 3-hydroxyacyl- dehydratase pasticcino 2 0.0
C-terminus
uagpf_v2_unigene51313 uagpf v2.0 688
AutoFact: Ethylene-responsive element binding factor-like protein n=5 Tax=Picea sitchensis RepID=E0ZGY9_PICSI 4.2039e-45
FL-Next: tr=Ethylene-responsive element binding factor-like protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: ethylene-responsive element binding factor-like protein 0.0
C-terminus
uagpf_v2_unigene51397 uagpf v2.0 464
AutoFact: Putative type-b response regulator (Sensor histidine kinase) n=1 Tax=Malus x domestica RepID=E4Z8Q8_MALDO 8.00001e-41
Blast2go: two-component response regulator arr2-like 1.00893e-43
unknown
uagpf_v2_unigene51406 uagpf v2.0 449
AutoFact: pfam00400, WD40, WD domain, G-beta repeat 1.0e-07
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: transcriptional corepressor leunig 0.0
Complete
uagpf_v2_unigene51411 uagpf v2.0 502
AutoFact: cyclin-dependent kinase F-1 [Arabidopsis thaliana] ref|NP_849468.1| cyclin-dependent kinase F-1 [Arabidopsis thaliana] sp|O80345.1|CDKF1_ARATH RecName: Full=Cyclin-dependent kinase F-1; Short=CDKF;1; AltName: Full=CDK-activating kinase 1-At; Short=CAK1-At 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: cyclin-dependent kinase f-1 0.0
C-terminus
uagpf_v2_unigene51423 uagpf v2.0 386
AutoFact: Putative wuschel homeobox protein WOX8/9 n=1 Tax=Picea abies RepID=D5LMH9_PICAB 2.0e-24
FL-Next: tr=Putative wuschel homeobox protein WOX8/9; Picea abies (Norway spruce) (Picea excelsa). 0.0
Blast2go: protein 2.55089e-28
C-terminus
uagpf_v2_unigene51468 uagpf v2.0 608
AutoFact: transducin/WD-40 repeat-containing protein [Arabidopsis thaliana] gb|AAM13156.1| unknown protein [Arabidopsis thaliana] gb|AAN15609.1| unknown protein [Arabidopsis thaliana] gb|AEE29984.1| transducin/WD-40 repeat-containing protein [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: transducin family protein 0.0
C-terminus
uagpf_v2_unigene51537 uagpf v2.0 504
AutoFact: Prolyl 4-hydroxylase alpha subunit, putative n=1 Tax=Ricinus communis RepID=B9RSW4_RICCO 0.0
FL-Next: tr=Putative prolyl 4-hydroxylase, alpha subunit; Cryptomeria japonica (Japanese cedar) (Cupressus japonica). 0.0
Blast2go: prolyl 4-hydroxylase alpha subunit-like protein 0.0
Putative N-terminus
uagpf_v2_unigene51624 uagpf v2.0 342
AutoFact: cyclin-dependent kinase F-1 [Arabidopsis thaliana] ref|NP_849468.1| cyclin-dependent kinase F-1 [Arabidopsis thaliana] sp|O80345.1|CDKF1_ARATH RecName: Full=Cyclin-dependent kinase F-1; Short=CDKF;1; AltName: Full=CDK-activating kinase 1-At; Short=CAK1-At 3.0e-34
Blast2go: cyclin-dependent kinase f-1 0.0
unknown
uagpf_v2_unigene51628 uagpf v2.0 337
AutoFact: Squamosa promoter-binding protein, putative n=1 Tax=Ricinus communis RepID=B9RSX0_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: squamosa promoter-binding-like protein 7 0.0
C-terminus
uagpf_v2_unigene51665 uagpf v2.0 260
AutoFact: Caprin-1_C multi-domain protein 6.0e-09
Blast2go: zinc finger protein 1.05389e-34
unknown
uagpf_v2_unigene51671 uagpf v2.0 246
AutoFact: polyubiquitin 4 [Arabidopsis thaliana] ref|XP_002881273.1| hypothetical protein ARALYDRAFT_482268 [Arabidopsis lyrata subsp. lyrata] sp|P0CH32.1|UBQ4_ARATH RecName: Full=Polyubiquitin 4; Contains: RecName: Full=Ubiquitin; Flags: Precursor emb|CAA31331.1| 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: ubiquitin 0.0
Putative N-terminus
uagpf_v2_unigene51700 uagpf v2.0 243
AutoFact: WD-repeat protein GhTTG2 [Gossypium hirsutum] gb|AAM95644.1| WD-repeat protein GhTTG2 [Gossypium hirsutum] 0.0
Blast2go: protein 0.0
unknown
uagpf_v2_unigene51709 uagpf v2.0 343
AutoFact: eukaryotic translation initiation factor 5 [Zea mays] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: eukaryotic translation initiation factor 5 0.0
N-terminus
uagpf_v2_unigene51722 uagpf v2.0 186
AutoFact: Whole genome shotgun sequence of line PN40024, scaffold_0.assembly12x (Fragment) n=2 Tax=Vitis vinifera RepID=D7SII5_VITVI 7.0e-19
FL-Next: tr=Putative uncharacterized protein; Oryza sativa subsp. indica (Rice). 0.0
Blast2go: proline-rich family protein 9.17759e-20
C-terminus
uagpf_v2_unigene51745 uagpf v2.0 348
AutoFact: 26S protease regulatory subunit 6A homolog A n=26 Tax=Magnoliophyta RepID=PS6AA_ARATH 0.0
Blast2go: 26s proteasome aaa-atpase subunit rpt5a 0.0
unknown

Go to Annotations List

Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain