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Assembly Name: uagpf v2.0

Name: nucleus

Term: GO:0005634  Help

Source: GO from Blast2go

Ontology: Cellular Component


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
uagpf_v2_unigene3386 uagpf v2.0 607
AutoFact: putative MYC transcription factor [Oryza sativa Japonica Group] 1.99965e-42
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: transcription factor 0.0
C-terminus
uagpf_v2_unigene3417 uagpf v2.0 1563
AutoFact: Ccaat-binding transcription factor, putative n=1 Tax=Ricinus communis RepID=B9RHZ1_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: nuclear transcription factor y subunit c-9 0.0
Complete
uagpf_v2_unigene3427 uagpf v2.0 732
AutoFact: Unassigned protein
Blast2go: unknown [Picea sitchensis] 2.51585e-21
unknown
uagpf_v2_unigene3443 uagpf v2.0 586
AutoFact: transcription factor bHLH30 [Arabidopsis thaliana] sp|Q9S7Y1.1|BH030_ARATH RecName: Full=Transcription factor bHLH30; AltName: Full=Basic helix-loop-helix protein 30; Short=AtbHLH30; Short=bHLH 30; AltName: Full=Transcription factor EN 53; AltName: Full=b 3.99931e-42
FL-Next: sp=Transcription factor bHLH30; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: transcription factor bhlh30 0.0
Internal
uagpf_v2_unigene3446 uagpf v2.0 545
AutoFact: pfam07808, RED_N, RED-like protein N-terminal region 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: splicing factor 0.0
Internal
uagpf_v2_unigene3453 uagpf v2.0 825
AutoFact: Enolase n=2 Tax=Selaginella moellendorffii RepID=D8QV15_SELML 0.0
FL-Next: sp=Enolase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: enolase 0.0
C-terminus
uagpf_v2_unigene3461 uagpf v2.0 552
AutoFact: Ethylene transcription factor n=2 Tax=Fagus sylvatica RepID=Q70AB2_FAGSY 6.0e-19
Blast2go: ap2 domain containing protein 2.25605e-23
Coding
uagpf_v2_unigene3479 uagpf v2.0 583
AutoFact: Receptor protein kinase CLAVATA1, putative n=1 Tax=Ricinus communis RepID=B9T173_RICCO 0.0
Blast2go: receptor-like protein kinase 0.0
Coding
uagpf_v2_unigene3486 uagpf v2.0 906
AutoFact: [L] COG1241 Predicted ATPase involved in replication control, Cdc46/Mcm family 0.0
FL-Next: sp=Protein PROLIFERA; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: minichromosome maintenance protein 0.0
Putative C-terminus
uagpf_v2_unigene3496 uagpf v2.0 454
AutoFact: Putative auxin response factor 5/7 (Fragment) n=1 Tax=Gnetum gnemon RepID=E1UHX8_GNEGN 0.0
Blast2go: auxin response factor 5-like 0.0
Coding
uagpf_v2_unigene3530 uagpf v2.0 733
AutoFact: homeobox-leucine zipper protein HDG2 [Arabidopsis thaliana] ref|NP_849596.1| homeobox-leucine zipper protein HDG2 [Arabidopsis thaliana] ref|NP_001184911.1| homeobox-leucine zipper protein HDG2 [Arabidopsis thaliana] sp|Q94C37.1|HDG2_ARATH RecName: Full=H 0.0
FL-Next: tr=Homeobox 1; Picea abies (Norway spruce) (Picea excelsa). 0.0
Blast2go: homeobox-leucine zipper protein hdg2 0.0
N-terminus
uagpf_v2_unigene3531 uagpf v2.0 449
AutoFact: pfam00010, HLH, Helix-loop-helix DNA-binding domain 5.0e-08
Blast2go: transcription factor bhlh49 0.0
unknown
uagpf_v2_unigene3532 uagpf v2.0 220
AutoFact: phosphoprotein phosphatase inhibitor [Arabidopsis thaliana] dbj|BAA97463.1| unnamed protein product [Arabidopsis thaliana] gb|AAK91364.1| AT5g52200/F17P19_10 [Arabidopsis thaliana] gb|AAM51572.1| AT5g52200/F17P19_10 [Arabidopsis thaliana] gb|AED96182.1| p 8.0e-26
Blast2go: phosphoprotein phosphatase inhibitor 0.0
Putative coding
uagpf_v2_unigene3535 uagpf v2.0 741
AutoFact: Phd/F-box containing protein n=1 Tax=Cucumis melo subsp. melo RepID=E5GBF1_CUCME 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: phd f-box containing 0.0
N-terminus
uagpf_v2_unigene3539 uagpf v2.0 160
AutoFact: phosphoprotein phosphatase inhibitor [Arabidopsis thaliana] dbj|BAA97463.1| unnamed protein product [Arabidopsis thaliana] gb|AAK91364.1| AT5g52200/F17P19_10 [Arabidopsis thaliana] gb|AAM51572.1| AT5g52200/F17P19_10 [Arabidopsis thaliana] gb|AED96182.1| p 9.0e-21
Blast2go: protein phosphatase inhibitor 2 containing protein 0.0
unknown
uagpf_v2_unigene3549 uagpf v2.0 502
AutoFact: RecName: Full=Splicing factor U2af large subunit B; AltName: Full=NpU2AF65b; AltName: Full=U2 auxiliary factor 65 kDa subunit B; AltName: Full=U2 small nuclear ribonucleoprotein auxiliary factor large subunit B; Short=U2 snRNP auxiliary factor large subun 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
Putative C-terminus
uagpf_v2_unigene3581 uagpf v2.0 580
AutoFact: abscisic acid responsive element-binding protein 2 [Populus suaveolens] 9.0e-35
Blast2go: dna binding 0.0
unknown
uagpf_v2_unigene3591 uagpf v2.0 405
AutoFact: Transcriptional corepressor LEUNIG n=1 Tax=Arabidopsis thaliana RepID=F4JUD2_ARATH 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: transcriptional corepressor leunig 0.0
Putative N-terminus
uagpf_v2_unigene3641 uagpf v2.0 339
AutoFact: AP2/ERF domain-containing transcription factor n=1 Tax=Populus trichocarpa RepID=B9HGP8_POPTR 3.0e-19
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: ap2 erf domain-containing transcription factor 5.84174e-24
Putative N-terminus
uagpf_v2_unigene3644 uagpf v2.0 449
AutoFact: CCR4-NOT transcription complex subunit 2 [Arabidopsis thaliana] gb|AEE28167.1| CCR4-NOT transcription complex subunit 2 [Arabidopsis thaliana] 3.0e-25
Blast2go: probable not transcription complex subunit vip2-like 2.09031e-28
unknown

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain