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Assembly Name: uagpf v2.0

Name: nucleus

Term: GO:0005634  Help

Source: GO from Blast2go

Ontology: Cellular Component


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
uagpf_v2_unigene49209 uagpf v2.0 249
AutoFact: AMP deaminase [Arabidopsis thaliana] ref|NP_850294.1| AMP deaminase [Arabidopsis thaliana] sp|O80452.2|AMPD_ARATH RecName: Full=AMP deaminase; Short=AtAMPD; AltName: Full=Protein EMBRYONIC FACTOR 1 gb|AAL07150.1| putative AMP deaminase [Arabidopsis thalia 0.0
FL-Next: sp=Probable AMP deaminase; Oryza sativa subsp. japonica (Rice). 0.0
Blast2go: amp deaminase 0.0
Internal
uagpf_v2_unigene49235 uagpf v2.0 418
AutoFact: Protein kinase [Medicago truncatula] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein kinase 0.0
Internal
uagpf_v2_unigene49250 uagpf v2.0 157
AutoFact: DNA-binding protein PcMYB1, putative [Arabidopsis thaliana] 0.0
Blast2go: telomere repeat binding factor 1 0.0
unknown
uagpf_v2_unigene49277 uagpf v2.0 248
AutoFact: WD-repeat protein, putative n=1 Tax=Ricinus communis RepID=B9RPC6_RICCO 1.0e-13
FL-Next: sp=Transcriptional corepressor LEUNIG; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: leunig 3.25626e-16
Putative C-terminus
uagpf_v2_unigene49330 uagpf v2.0 333
AutoFact: [J] COG5192 GTP-binding protein required for 40S ribosome biogenesis 0.0
FL-Next: tr=Putative uncharacterized protein; Selaginella moellendorffii (Spikemoss). 0.0
Blast2go: ribosome biogenesis protein bms1 homolog 0.0
Internal
uagpf_v2_unigene49352 uagpf v2.0 235
AutoFact: DNA damage-inducible protein 1 [Arabidopsis thaliana] ref|NP_001189877.1| DNA damage-inducible protein 1 [Arabidopsis thaliana] gb|ABG25069.1| At3g13235 [Arabidopsis thaliana] dbj|BAE98897.1| hypothetical protein [Arabidopsis thaliana] gb|AEE75323.1| DNA 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: dna damage-inducible protein 1 0.0
Internal
uagpf_v2_unigene49359 uagpf v2.0 349
AutoFact: Unassigned protein
FL-Next: sp=RNA polymerase II C-terminal domain phosphatase-like 1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: rna polymerase ii c-terminal domain phosphatase-like 1-like 0.0
Internal
uagpf_v2_unigene49439 uagpf v2.0 295
AutoFact: Zinc finger protein, putative n=1 Tax=Ricinus communis RepID=B9RRH5_RICCO 4.0e-35
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: zinc finger hit domain-containing protein 1 2.8026e-45
Internal
uagpf_v2_unigene49479 uagpf v2.0 155
AutoFact: Bromodomain-containing protein, putative n=1 Tax=Ricinus communis RepID=B9RAK3_RICCO 0.0
Blast2go: nuclear protein x1 0.0
unknown
uagpf_v2_unigene49602 uagpf v2.0 524
AutoFact: protein MOTHER of FT and TF 1 [Arabidopsis thaliana] sp|Q9XFK7.1|MFT_ARATH RecName: Full=Protein MOTHER of FT and TF 1 gb|AAD37380.1|AF147721_1 E12A11 protein [Arabidopsis thaliana] gb|AAF78390.1|AC069551_23 T10O22.8 [Arabidopsis thaliana] gb|AAF97827.1|A 0.0
Blast2go: protein 0.0
unknown
uagpf_v2_unigene49679 uagpf v2.0 403
AutoFact: translation initiation factor 3 subunit B [Arabidopsis thaliana] sp|Q9C5Z1.1|EIF3B_ARATH RecName: Full=Eukaryotic translation initiation factor 3 subunit B; Short=eIF3b; AltName: Full=eIF-3-eta; AltName: Full=eIF3 p110; AltName: Full=p82 gb|AAG53615.1|AF2 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: eukaryotic translation initiation factor 3 subunit b-like 0.0
C-terminus
uagpf_v2_unigene49683 uagpf v2.0 532
AutoFact: NAC domain-containing protein 78 [Arabidopsis thaliana] sp|Q84K00.2|NAC78_ARATH RecName: Full=NAC domain-containing protein 78; Short=ANAC078 emb|CAB85547.1| putative protein [Arabidopsis thaliana] gb|AAM20460.1| putative protein [Arabidopsis thaliana] gb 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: nac domain ipr003441 0.0
C-terminus
uagpf_v2_unigene49686 uagpf v2.0 445
AutoFact: microtubule-associated protein, RP/EB family [Arabidopsis thaliana] dbj|BAB11500.1| microtubule-associated protein EB1-like protein [Arabidopsis thaliana] gb|AAM61163.1| microtubule-associated protein EB1-like protein [Arabidopsis thaliana] gb|AED97615.1| 0.0
Blast2go: microtubule-associated protein rp eb family member 1-like isoform 2 0.0
unknown
uagpf_v2_unigene49693 uagpf v2.0 478
AutoFact: phosphoglucomutase [Bambusa oldhamii] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: phosphoglucomutase 0.0
C-terminus
uagpf_v2_unigene49709 uagpf v2.0 430
AutoFact: High mobility group family n=1 Tax=Populus trichocarpa RepID=A9PB77_POPTR 2.0e-36
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: high mobility group b protein 7-like 0.0
Putative N-terminus
uagpf_v2_unigene49764 uagpf v2.0 472
AutoFact: Unassigned protein
FL-Next: tr=Predicted protein; Hordeum vulgare var. distichum (Two-rowed barley). 0.0
Blast2go: protein 0.0
C-terminus
uagpf_v2_unigene49765 uagpf v2.0 471
AutoFact: Spotted leaf protein, putative n=1 Tax=Ricinus communis RepID=B9T786_RICCO 0.0
FL-Next: sp=U-box domain-containing protein 13; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: protein 0.0
N-terminus
uagpf_v2_unigene49766 uagpf v2.0 482
AutoFact: transducin/WD-40 repeat-containing protein [Arabidopsis thaliana] gb|AAM13156.1| unknown protein [Arabidopsis thaliana] gb|AAN15609.1| unknown protein [Arabidopsis thaliana] gb|AEE29984.1| transducin/WD-40 repeat-containing protein [Arabidopsis thaliana] 9.0e-14
Blast2go: transducin family protein 1.89164e-16
unknown
uagpf_v2_unigene49832 uagpf v2.0 398
AutoFact: bZIP transcription factor bZIP50 [Glycine max] 0.0
Blast2go: protein 0.0
unknown
uagpf_v2_unigene49916 uagpf v2.0 258
AutoFact: TFIIF_alpha multi-domain protein 9.0e-08
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: cax-interacting protein 4 0.0
C-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain