Sustainpine_db
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Assembly Name: uagpf v2.0

Name: nucleus

Term: GO:0005634  Help

Source: GO from Blast2go

Ontology: Cellular Component


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
uagpf_v2_unigene48246 uagpf v2.0 204
AutoFact: phy rapidly regulated 2 protein [Arabidopsis thaliana] emb|CAB88302.1| putative protein [Arabidopsis thaliana] gb|AAR92241.1| At3g58850 [Arabidopsis thaliana] gb|AAS76234.1| At3g58850 [Arabidopsis thaliana] dbj|BAF01099.1| hypothetical protein [Arabidopsi 2.0e-07
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: phy rapidly regulated 2 protein 0.0
Internal
uagpf_v2_unigene48287 uagpf v2.0 376
AutoFact: HEAT repeat, putative n=4 Tax=Oryza sativa Japonica Group RepID=Q53K35_ORYSJ 5.99756e-43
FL-Next: tr=Putative uncharacterized protein Sb01g009860; Sorghum bicolor (Sorghum) (Sorghum vulgare). 0.0
Blast2go: translational activator gcn1 0.0
Internal
uagpf_v2_unigene48475 uagpf v2.0 348
AutoFact: Transcription factor viviparous 1 n=1 Tax=Picea abies RepID=Q9FVK1_PICAB 0.0
FL-Next: tr=VP1/ABI3-like protein; Callitropsis nootkatensis. 0.0
Blast2go: abscisic acid-insensitive protein 3 0.0
Internal
uagpf_v2_unigene48492 uagpf v2.0 366
AutoFact: protein ULTRAPETALA 1 [Arabidopsis thaliana] sp|Q8GZA8.1|ULT1_ARATH RecName: Full=Protein ULTRAPETALA 1 dbj|BAC41785.1| unknown protein [Arabidopsis thaliana] gb|ABH04520.1| At4g28190 [Arabidopsis thaliana] gb|AEE85451.1| protein ULTRAPETALA 1 [Arabidopsi 2.0e-12
FL-Next: sp=Protein ULTRAPETALA 1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: transcription factor 2.79463e-15
Internal
uagpf_v2_unigene48547 uagpf v2.0 129
AutoFact: Transcription factor, putative n=1 Tax=Ricinus communis RepID=B9RJU4_RICCO 7.0e-08
Blast2go: conserved peptide upstream open reading frame 37 0.0
unknown
uagpf_v2_unigene48579 uagpf v2.0 282
AutoFact: 1,2-dihydroxy-3-keto-5-methylthiopentene dioxygenase [Bos taurus] sp|Q3ZBL1.1|MTND_BOVIN RecName: Full=1,2-dihydroxy-3-keto-5-methylthiopentene dioxygenase; AltName: Full=Acireductone dioxygenase (Ni(2+)-requiring); Short=ARD; Short=Ni-ARD gb|AAI03236.1| 3.0e-09
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: dihydroxy-3-keto-5-methylthiopentene dioxygenase 8.29569e-13
Internal
uagpf_v2_unigene48582 uagpf v2.0 251
AutoFact: Protease degQ, putative n=1 Tax=Ricinus communis RepID=B9SF71_RICCO 0.0
FL-Next: sp=Protease Do-like 1, chloroplastic; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: serine-type peptidase 0.0
Internal
uagpf_v2_unigene48594 uagpf v2.0 416
AutoFact: SEC7-like guanine nucleotide exchange protein [Arabidopsis thaliana] gb|AAF76474.1|AC020622_8 Contains similarity to a guanine nucleotide exchange factor from Homo sapiens gb|AF111162 and contains a Sec7 PF|01369 domain [Arabidopsis thaliana] gb|AEE27360. 3.00018e-42
FL-Next: tr=Predicted protein; subsp. trichocarpa). 0.0
Blast2go: brefeldin a-inhibited guanine nucleotide-exchange protein 1-like 0.0
Internal
uagpf_v2_unigene48606 uagpf v2.0 265
AutoFact: bZIP DNA-binding protein [Petroselinum crispum] 0.0
Blast2go: transcription factor hbp-1a 0.0
unknown
uagpf_v2_unigene48700 uagpf v2.0 355
AutoFact: cohesin complex subunit SA-1/2 [Arabidopsis thaliana] emb|CAB45374.1| stromalin protein [Arabidopsis thaliana] gb|AAL36271.1| putative putative sister-chromatide cohesion protein [Arabidopsis thaliana] gb|AAC63652.2| putative putative sister-chromatide co 0.0
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: sister-chromatide cohesion protein 0.0
Internal
uagpf_v2_unigene48741 uagpf v2.0 323
AutoFact: RecName: Full=B3 domain-containing protein LFL1; AltName: Full=LEC2 and FUSCA3-like protein 1; Short=OsLFL1 gb|ABO64645.1| LFL1 [Oryza sativa Japonica Group] 1.0e-30
Blast2go: b3 domain-containing protein 1.39907e-32
Coding
uagpf_v2_unigene48773 uagpf v2.0 337
AutoFact: Putative auxin response factor 6/8 n=1 Tax=Ephedra distachya RepID=E1UHX6_EPHDI 0.0
FL-Next: tr=Putative auxin response factor 6/8; Ginkgo biloba (Ginkgo) (Maidenhair tree). 0.0
Blast2go: arf6 0.0
Internal
uagpf_v2_unigene48818 uagpf v2.0 342
AutoFact: CENP-C (Fragment) n=1 Tax=Glycine max RepID=Q66LH3_SOYBN 5.0e-15
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: cenp-c 8.10873e-19
Putative C-terminus
uagpf_v2_unigene48838 uagpf v2.0 259
AutoFact: Homeobox 1 n=1 Tax=Picea abies RepID=Q9FR59_PICAB 0.0
FL-Next: tr=Homeobox 1; Picea abies (Norway spruce) (Picea excelsa). 0.0
Blast2go: homeobox-leucine zipper protein hdg2-like 0.0
Internal
uagpf_v2_unigene49009 uagpf v2.0 272
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Ricinus communis (Castor bean). 0.0
Blast2go: histidine kinase- dna gyrase b- and hsp90-like atpase family protein 1.35496e-32
Internal
uagpf_v2_unigene49079 uagpf v2.0 302
AutoFact: RNA binding protein, putative n=1 Tax=Ricinus communis RepID=B9SBN7_RICCO 0.0
Blast2go: protein 0.0
Putative coding
uagpf_v2_unigene49092 uagpf v2.0 405
AutoFact: E3 SUMO-protein ligase SIZ1 [Arabidopsis thaliana] ref|NP_001119465.1| E3 SUMO-protein ligase SIZ1 [Arabidopsis thaliana] gb|AED97324.1| E3 SUMO-protein ligase SIZ1 [Arabidopsis thaliana] gb|AED97328.1| E3 SUMO-protein ligase SIZ1 [Arabidopsis thaliana] 0.0
FL-Next: Isoform 2 of E3 SUMO-protein ligase SIZ1 OS=Arabidopsis thaliana GN=SIZ1 0.0
Blast2go: e3 sumo-protein ligase siz1 0.0
Internal
uagpf_v2_unigene49118 uagpf v2.0 210
AutoFact: UVB-resistance protein UVR8 [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: rcc1 and btb domain-containing protein 0.0
Internal
uagpf_v2_unigene49158 uagpf v2.0 345
AutoFact: putative DNA-binding protein [Arabidopsis thaliana] emb|CAB77810.1| putative DNA-binding protein [Arabidopsis thaliana] emb|CAD29664.1| homeodomain protein 14 [Arabidopsis thaliana] gb|ABH04479.1| At4g03250 [Arabidopsis thaliana] 5.0e-12
Blast2go: homeobox-leucine zipper family protein 0.0
unknown
uagpf_v2_unigene49183 uagpf v2.0 198
AutoFact: DNA-damage-repair/toleration protein DRT102, putative n=1 Tax=Ricinus communis RepID=B9RES2_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: dna-damage-repair toleration protein drt102 0.0
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain