Sustainpine_db
HomeAssembliesBLASTSearchInstitutions

Assembly Name: uagpf v2.0

Name: nucleus

Term: GO:0005634  Help

Source: GO from Blast2go

Ontology: Cellular Component


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
uagpf_v2_unigene45189 uagpf v2.0 285
AutoFact: putative DNA-binding protein [Arabidopsis thaliana] emb|CAB77810.1| putative DNA-binding protein [Arabidopsis thaliana] emb|CAD29664.1| homeodomain protein 14 [Arabidopsis thaliana] gb|ABH04479.1| At4g03250 [Arabidopsis thaliana] 3.0e-33
Blast2go: homeobox-leucine zipper family protein 0.0
Coding
uagpf_v2_unigene45198 uagpf v2.0 381
AutoFact: protein pleiotropic regulatory locus 1 [Arabidopsis thaliana] sp|Q42384.1|PRL1_ARATH RecName: Full=Protein pleiotropic regulatory locus 1; Short=Protein PRL1; AltName: Full=MOS4-associated complex protein 2; Short=MAC protein 2 emb|CAA58031.1| PRL1 [Arabi 3.0e-13
FL-Next: sp=Protein pleiotropic regulatory locus 1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: prl1 protein 2.43804e-16
Internal
uagpf_v2_unigene45248 uagpf v2.0 359
AutoFact: tyrosyl-DNA phosphodiesterase 1 [Arabidopsis thaliana] gb|AAN13014.1| unknown protein [Arabidopsis thaliana] gb|ACO60340.1| tyrosyl-DNA phosphodiesterase I [Arabidopsis thaliana] gb|AED92124.1| tyrosyl-DNA phosphodiesterase 1 [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein At5g15170; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: tyrosyl-dna phosphodiesterase 1-like 0.0
Internal
uagpf_v2_unigene45284 uagpf v2.0 424
AutoFact: structural maintenance of chromosomes 1 protein [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: structural maintenance of chromosomes 1 0.0
Internal
uagpf_v2_unigene45387 uagpf v2.0 252
AutoFact: DNA binding protein, putative n=1 Tax=Ricinus communis RepID=B9RY52_RICCO 0.0
Blast2go: dna binding 0.0
Putative coding
uagpf_v2_unigene45406 uagpf v2.0 378
AutoFact: transcription factor TCP9 [Arabidopsis thaliana] sp|O64647.1|TCP9_ARATH RecName: Full=Transcription factor TCP9 gb|AAK43925.1|AF370606_1 putative PCF2-like DNA binding protein [Arabidopsis thaliana] gb|AAC06168.1| putative PCF2-like DNA binding protein [A 1.0e-31
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: transcription factor tcp9-like 1.85e-39
Putative N-terminus
uagpf_v2_unigene45419 uagpf v2.0 413
AutoFact: Ccaat-binding transcription factor, putative n=1 Tax=Ricinus communis RepID=B9RHZ1_RICCO 2.0e-09
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: nuclear transcription factor y subunit c-2 3.49541e-11
Internal
uagpf_v2_unigene45481 uagpf v2.0 262
AutoFact: kinesin 1 [Arabidopsis thaliana] sp|Q07970.1|ATK1_ARATH RecName: Full=Kinesin-1; AltName: Full=Kinesin-like protein A dbj|BAA01972.1| kinesin-like motor protein heavy chain [Arabidopsis thaliana] emb|CAA17546.1| kinesin-related protein katA [Arabidopsis t 9.94922e-44
FL-Next: sp=Kinesin-1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: kinesin-like protein 0.0
Internal
uagpf_v2_unigene45559 uagpf v2.0 258
AutoFact: DUF3537 multi-domain protein 0.0
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: protein 0.0
Internal
uagpf_v2_unigene45587 uagpf v2.0 317
AutoFact: RHO guanyl-nucleotide exchange factor 11 [Arabidopsis thaliana] gb|AAF29412.1|AC022354_11 dynein light chain, putative [Arabidopsis thaliana] gb|AAG51538.1|AC037424_3 unknown protein; 73838-74229 [Arabidopsis thaliana] gb|AAR20740.1| At1g52250 [Arabidopsi 2.0e-30
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: cytoplasmic dynein light 0.0
N-terminus
uagpf_v2_unigene45588 uagpf v2.0 396
AutoFact: SWI/SNF complex subunit SWI3B [Arabidopsis thaliana] sp|Q84JG2.1|SWI3B_ARATH RecName: Full=SWI/SNF complex subunit SWI3B; Short=AtSWI3B; AltName: Full=Transcription regulatory protein SWI3B gb|AAO42112.1| putative SWI/SNF complex subunit SW13 [Arabidopsis 1.0e-39
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: swi snf complex subunit swi3b 0.0
Internal
uagpf_v2_unigene45634 uagpf v2.0 338
AutoFact: Hexokinase n=1 Tax=Citrus sinensis RepID=Q9FVD3_CITSI 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: hexokinase 1 0.0
Internal
uagpf_v2_unigene45637 uagpf v2.0 380
AutoFact: Transcription factor, putative n=1 Tax=Ricinus communis RepID=B9SR79_RICCO 1.0e-30
Blast2go: kanadi like transcription factor 6.16344e-36
Coding
uagpf_v2_unigene45675 uagpf v2.0 263
AutoFact: DELLA domain GRAS family transcription factor rga-like protein n=2 Tax=Populus trichocarpa RepID=B9GV61_POPTR 0.0
FL-Next: sp=DELLA protein SLR1; Oryza sativa subsp. japonica (Rice). 0.0
Blast2go: della protein 0.0
Internal
uagpf_v2_unigene45704 uagpf v2.0 322
AutoFact: G patch domain-containing protein 1 [Arabidopsis thaliana] dbj|BAC42755.1| unknown protein [Arabidopsis thaliana] gb|AAP40415.1| unknown protein [Arabidopsis thaliana] gb|AED93116.1| G patch domain-containing protein 1 [Arabidopsis thaliana] 2.0e-28
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: g patch domain-containing protein 1 2.51327e-34
Internal
uagpf_v2_unigene45710 uagpf v2.0 219
AutoFact: class II KNOX homeobox transcription factor [Medicago truncatula] 0.0
Blast2go: homeobox protein knotted-1-like 3-like 0.0
Coding
uagpf_v2_unigene45769 uagpf v2.0 163
AutoFact: kinesin 5 [Arabidopsis thaliana] gb|AEE82489.1| kinesin 5 [Arabidopsis thaliana] 0.0
FL-Next: sp=Kinesin-3; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: kinesin-like protein 0.0
Internal
uagpf_v2_unigene45786 uagpf v2.0 138
AutoFact: Beta-amylase (Fragment) n=5 Tax=Pseudotsuga RepID=C6F9P9_PSEMZ 1.0e-33
FL-Next: sp=Beta-amylase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: beta-amylase 8.08549e-43
Internal
uagpf_v2_unigene45820 uagpf v2.0 467
AutoFact: SH3 domain-containing protein [Arabidopsis thaliana] gb|AAP04158.1| unknown protein [Arabidopsis thaliana] dbj|BAD93870.1| hypothetical protein [Arabidopsis thaliana] gb|AEC06049.1| SH3 domain-containing protein [Arabidopsis thaliana] 0.0
Blast2go: sh3 domain-containing protein 0.0
Putative coding
uagpf_v2_unigene45856 uagpf v2.0 411
AutoFact: [L] COG1241 Predicted ATPase involved in replication control, Cdc46/Mcm family 1.0e-37
Blast2go: at2g07360-like protein 0.0
unknown

Go to Annotations List

Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain