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Assembly Name: uagpf v2.0

Name: nucleus

Term: GO:0005634  Help

Source: GO from Blast2go

Ontology: Cellular Component


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
uagpf_v2_unigene43891 uagpf v2.0 186
AutoFact: WS0383.C21_J13 SS-B-23 Picea sitchensis cDNA clone WS0383_J13 3', mRNA sequence. 0.0
FL-Next: sp=Nuclear cap-binding protein subunit 1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: nuclear cap-binding protein 0.0
Internal
uagpf_v2_unigene43895 uagpf v2.0 222
AutoFact: aprataxin [Arabidopsis thaliana] sp|Q9M041.1|BH140_ARATH RecName: Full=Transcription factor bHLH140; AltName: Full=Basic helix-loop-helix protein 140; Short=AtbHLH140; Short=bHLH 140; AltName: Full=Transcription factor EN 122; AltName: Full=bHLH transcrip 5.0e-32
FL-Next: sp=Transcription factor bHLH140; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: transcription factor bhlh140-like 2.10195e-43
Internal
uagpf_v2_unigene44070 uagpf v2.0 267
AutoFact: Transcription factor viviparous 1 n=1 Tax=Picea abies RepID=Q9FVK1_PICAB 0.0
FL-Next: tr=Transcription factor viviparous 1; Picea abies (Norway spruce) (Picea excelsa). 0.0
Blast2go: abscisic acid-insensitive protein 3 0.0
Internal
uagpf_v2_unigene44126 uagpf v2.0 316
AutoFact: zinc finger (MYND type) family protein / F-box family protein [Arabidopsis thaliana] sp|Q9FYF9.1|FB76_ARATH RecName: Full=F-box protein At1g67340 gb|AAG00241.1|AC002130_6 F1N21.16 [Arabidopsis thaliana] gb|AAL14418.1| At1g67340/F1N21_16 [Arabidopsis thali 0.0
Blast2go: f-box protein at1g67340-like 0.0
unknown
uagpf_v2_unigene44163 uagpf v2.0 274
AutoFact: Histidine kinase 1 plant, putative n=1 Tax=Ricinus communis RepID=B9RNF2_RICCO 3.00004e-41
FL-Next: sp=Histidine kinase CKI1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: histidine kinase 1 0.0
Internal
uagpf_v2_unigene44179 uagpf v2.0 309
AutoFact: unknow protein [Oryza sativa Japonica Group] 0.0001
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: histidine kinase- dna gyrase b- and hsp90-like atpase family protein 2.36873e-16
Internal
uagpf_v2_unigene44231 uagpf v2.0 308
AutoFact: PREDICTED: translation initiation factor eIF-2B subunit epsilon-like n=1 Tax=Anolis carolinensis RepID=UPI000203A043 2.0e-11
Blast2go: translation initiation factor eif-2b subunit epsilon 5.19436e-16
Coding
uagpf_v2_unigene44290 uagpf v2.0 339
AutoFact: basic leucine zipper transcription factor-like protein [Arabidopsis thaliana] gb|AAK84223.1|AF401300_1 transcription factor bZIP61 [Arabidopsis thaliana] emb|CAB68150.1| putative protein [Arabidopsis thaliana] gb|AAM13052.1| pelota-like protein [Arabidops 1.0e-21
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: bzip transcription factor family protein 1.40192e-26
Internal
uagpf_v2_unigene44297 uagpf v2.0 349
AutoFact: putative glycine-rich protein [Oryza sativa Japonica Group] 0.0
FL-Next: tr=Putative uncharacterized protein; Ricinus communis (Castor bean). 0.0
Blast2go: protein 0.0
Internal
uagpf_v2_unigene44434 uagpf v2.0 159
AutoFact: putative cleavage and polyadenylation specificity factor 160 kDa subunit [Arabidopsis thaliana] 2.0e-35
FL-Next: sp=Cleavage and polyadenylation specificity factor subunit 1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: cleavage and polyadenylation specificity factor 0.0
Internal
uagpf_v2_unigene44437 uagpf v2.0 372
AutoFact: Type I MADS-box transcription factor n=1 Tax=Cryptomeria japonica RepID=B2ZX88_CRYJA 7.0e-33
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: mads-box domain-containing protein 1.4013e-45
N-terminus
uagpf_v2_unigene44512 uagpf v2.0 277
AutoFact: Predicted protein n=2 Tax=Physcomitrella patens RepID=A9TKM8_PHYPA 0.0
Blast2go: protein 0.0
unknown
uagpf_v2_unigene44578 uagpf v2.0 269
AutoFact: cyclin [Adiantum capillus-veneris] 0.0
Blast2go: protein 0.0
Coding
uagpf_v2_unigene44601 uagpf v2.0 300
AutoFact: HASTY [Arabidopsis thaliana] 3.0e-20
FL-Next: sp=Protein HASTY 1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: protein hasty 1-like 2.34917e-24
Internal
uagpf_v2_unigene44935 uagpf v2.0 222
AutoFact: Whole genome shotgun sequence of line PN40024, scaffold_8.assembly12x (Fragment) n=2 Tax=Vitis vinifera RepID=D7SV05_VITVI 0.0
FL-Next: sp=Histone-lysine N-methyltransferase ATX3; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: histone-lysine n-methyltransferase 0.0
Internal
uagpf_v2_unigene44958 uagpf v2.0 351
AutoFact: Transcriptional adapter ADA2 n=9 Tax=Poaceae RepID=TADA2_ORYSJ 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: transcriptional adapter ada2-like 0.0
N-terminus
uagpf_v2_unigene44984 uagpf v2.0 400
AutoFact: HASTY [Arabidopsis thaliana] 2.0e-34
FL-Next: sp=Protein HASTY 1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: protein hasty 1-like 0.0
C-terminus
uagpf_v2_unigene45047 uagpf v2.0 325
AutoFact: RecName: Full=Squamosa promoter-binding-like protein 15 sp|A2YX04.1|SPL15_ORYSI RecName: Full=Squamosa promoter-binding-like protein 15 dbj|BAD10073.1| putative SPL1-Related2 protein [Oryza sativa Japonica Group] gb|EAZ07615.1| hypothetical protein OsI_29 7.0e-31
FL-Next: sp=Squamosa promoter-binding-like protein 15; Oryza sativa subsp. japonica (Rice). 0.0
Blast2go: squamosa promoter-binding-like protein 14-like 6.92821e-38
Internal
uagpf_v2_unigene45089 uagpf v2.0 386
AutoFact: NIN like protein 7 [Arabidopsis thaliana] sp|Q84TH9.2|NLP7_ARATH RecName: Full=Protein NLP7; Short=AtNLP7; AltName: Full=NIN-like protein 7; AltName: Full=Nodule inception protein-like protein 7 gb|AAB63621.1| unknown protein [Arabidopsis thaliana] emb|CA 3.0e-12
FL-Next: sp=Protein NLP3; Oryza sativa subsp. japonica (Rice). 0.0
Blast2go: rwp-rk domain-containing protein 1.14585e-15
Internal
uagpf_v2_unigene45111 uagpf v2.0 200
AutoFact: DNA polymerase delta catalytic subunit n=6 Tax=Poaceae RepID=DPOD1_ORYSJ 0.0
Blast2go: dna polymerase delta subunit 1 0.0
unknown

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain