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Assembly Name: uagpf v2.0

Name: nucleus

Term: GO:0005634  Help

Source: GO from Blast2go

Ontology: Cellular Component


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
uagpf_v2_unigene43248 uagpf v2.0 257
AutoFact: putative CCR4-associated factor 1-7 [Arabidopsis thaliana] sp|Q9SKZ2.2|CAF1G_ARATH RecName: Full=Probable CCR4-associated factor 1 homolog 7 gb|AAK93623.1| putative CCR4-associated factor [Arabidopsis thaliana] gb|AAD15397.2| putative CCR4-associated fact 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: ccr4-associated factor 0.0
N-terminus
uagpf_v2_unigene43266 uagpf v2.0 227
AutoFact: Fkbp-rapamycin associated protein, putative n=1 Tax=Ricinus communis RepID=B9RWX7_RICCO 9.0e-19
FL-Next: sp=Serine/threonine-protein kinase TOR; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: fkbp12-rapamycin complex-associated protein 1.88264e-18
Internal
uagpf_v2_unigene43271 uagpf v2.0 142
AutoFact: putative glycine-rich protein [Oryza sativa Japonica Group] 0.0
Blast2go: protein 0.0
unknown
uagpf_v2_unigene43339 uagpf v2.0 333
AutoFact: SWI/SNF complex subunit SWI3C [Arabidopsis thaliana] sp|Q9XI07.1|SWI3C_ARATH RecName: Full=SWI/SNF complex subunit SWI3C; Short=AtSWI3C; AltName: Full=Transcription regulatory protein SWI3C gb|AAD41423.1|AC007727_12 Contains similarity to gb|AF033823 moir 0.0
FL-Next: sp=SWI/SNF complex subunit SWI3C; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: swi snf complex subunit swi3c-like 0.0
Internal
uagpf_v2_unigene43431 uagpf v2.0 366
AutoFact: RNA-binding protein, putative n=1 Tax=Ricinus communis RepID=B9T403_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: rna-binding protein 5 10 0.0
Putative N-terminus
uagpf_v2_unigene43436 uagpf v2.0 243
AutoFact: Bromodomain-containing protein, putative n=1 Tax=Ricinus communis RepID=B9RAK3_RICCO 0.0
Blast2go: nuclear protein x1 0.0
Putative coding
uagpf_v2_unigene43490 uagpf v2.0 208
AutoFact: BTB-POZ and math domain-containing protein [Arabidopsis thaliana] sp|Q8L765.1|BPM1_ARATH RecName: Full=BTB/POZ and MATH domain-containing protein 1; AltName: Full=Protein BTB-POZ AND MATH DOMAIN 1; Short=AtBPM1 gb|AAM97116.1| putative protein [Arabidopsis 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
Internal
uagpf_v2_unigene43510 uagpf v2.0 293
AutoFact: zinc finger (MYND type) family protein / F-box family protein [Arabidopsis thaliana] sp|Q9FYF9.1|FB76_ARATH RecName: Full=F-box protein At1g67340 gb|AAG00241.1|AC002130_6 F1N21.16 [Arabidopsis thaliana] gb|AAL14418.1| At1g67340/F1N21_16 [Arabidopsis thali 2.94273e-44
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: f-box protein at1g67340-like 0.0
Internal
uagpf_v2_unigene43513 uagpf v2.0 195
AutoFact: regulator of G-protein signaling 1 [Arabidopsis thaliana] gb|AAN12971.1| unknown protein [Arabidopsis thaliana] gb|AEE77116.1| regulator of G-protein signaling 1 [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: regulator of g-protein signaling 1 0.0
Internal
uagpf_v2_unigene43536 uagpf v2.0 357
AutoFact: 26S proteasome regulatory subunit N6 [Arabidopsis thaliana] gb|AAF88122.1|AC021043_15 Similar to 26S proteasome subunits [Arabidopsis thaliana] gb|AAK44018.1|AF370203_1 putative 19S proteosome subunit 9 [Arabidopsis thaliana] gb|AAL07160.1| putative 19S p 0.0
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: protein 0.0
Putative N-terminus
uagpf_v2_unigene43558 uagpf v2.0 271
AutoFact: WS0383.C21_J13 SS-B-23 Picea sitchensis cDNA clone WS0383_J13 3', mRNA sequence. 0.0
FL-Next: sp=Nuclear cap-binding protein subunit 1; Oryza sativa subsp. japonica (Rice). 0.0
Blast2go: nuclear cap-binding protein 0.0
Internal
uagpf_v2_unigene43603 uagpf v2.0 350
AutoFact: Drought responsive element binding protein 2 n=3 Tax=Glycine max RepID=C5IU97_SOYBN 1.0e-30
FL-Next: tr=Transcription factor AP2; Taxus cuspidata (Japanese yew). 0.0
Blast2go: dehydration-responsive element binding protein 2 1.38465e-38
Internal
uagpf_v2_unigene43607 uagpf v2.0 431
AutoFact: phantastica-like MYB protein [Eschscholzia californica subsp. californica] 7.0e-38
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: asymmetric leaves1 and rough 1.4013e-45
Putative N-terminus
uagpf_v2_unigene43617 uagpf v2.0 167
AutoFact: U2 snrnp auxiliary factor, small subunit, putative n=1 Tax=Ricinus communis RepID=B9SRG2_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: u2 snrnp auxiliary small 0.0
Internal
uagpf_v2_unigene43656 uagpf v2.0 348
AutoFact: DNA topoisomerase 2 (Fragment) n=1 Tax=Vitis vinifera RepID=D7T341_VITVI 0.0
FL-Next: sp=DNA topoisomerase 2; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: dna topoisomerase ii 0.0
Internal
uagpf_v2_unigene43727 uagpf v2.0 149
AutoFact: Histone H3 n=1 Tax=Physcomitrella patens subsp. patens RepID=A9U534_PHYPA 2.0e-24
Blast2go: cenh3 1.87561e-29
unknown
uagpf_v2_unigene43745 uagpf v2.0 390
AutoFact: D3-type cyclin (Fragment) n=3 Tax=Populus RepID=A8Y914_POPTR 0.0
Blast2go: d3-type cyclin 0.0
unknown
uagpf_v2_unigene43752 uagpf v2.0 446
AutoFact: Pseudo response regulator n=2 Tax=Populus RepID=B9N4C8_POPTR 8.0e-35
FL-Next: tr=Response regulator 1; Pinus pinea (Italian stone pine). 0.0
Blast2go: timing of cab expression 1 2.03129e-40
N-terminus
uagpf_v2_unigene43767 uagpf v2.0 225
AutoFact: DNA mismatch repair protein PMS2 [Arabidopsis thaliana] gb|AAL01156.1| DNA mismatch repair protein [Arabidopsis thaliana] gb|AEE82175.1| DNA mismatch repair protein PMS2 [Arabidopsis thaliana] 2.99878e-43
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: mismatch repair endonuclease pms2-like 2.10195e-44
Internal
uagpf_v2_unigene43886 uagpf v2.0 174
AutoFact: DUF298 domain containing protein 2.0e-37
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
Putative N-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain