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Assembly Name: uagpf v2.0

Name: nucleus

Term: GO:0005634  Help

Source: GO from Blast2go

Ontology: Cellular Component

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
uagpf_v2_unigene42279 uagpf v2.0 459
• AutoFact: WRC multi-domain protein 1.0e-21
• Blast2go: protein 0.0
Putative coding
uagpf_v2_unigene42343 uagpf v2.0 315
• AutoFact: [R] COG2319 FOG: WD40 repeat 3.0e-07
• FL-Next: Isoform 1 of Topless-related protein 1 OS=Arabidopsis thaliana GN=TPR1 0.0
• Blast2go: wd repeat-containing 0.0
Internal
uagpf_v2_unigene42346 uagpf v2.0 326
• AutoFact: YDG_SRA multi-domain protein 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: zinc finger 0.0
Internal
uagpf_v2_unigene42373 uagpf v2.0 238
• AutoFact: GC-rich sequence DNA-binding factor [Arabidopsis thaliana] dbj|BAB10004.1| unnamed protein product [Arabidopsis thaliana] dbj|BAF36503.1| transcriptional repressor ILP1 [Arabidopsis thaliana] gb|AED91319.1| GC-rich sequence DNA-binding factor [Arabidopsis 7.0e-12
• Blast2go: gc-rich sequence dna-binding factor 1-like 1.78089e-19
unknown
uagpf_v2_unigene42433 uagpf v2.0 480
• AutoFact: Receptor protein kinase CLAVATA1, putative n=1 Tax=Ricinus communis RepID=B9RRZ6_RICCO 0.0
• Blast2go: leucine rich repeat receptor protein kinase clavata1 0.0
unknown
uagpf_v2_unigene42434 uagpf v2.0 275
• AutoFact: Eukaryotic translation initiation factor 2c, putative n=1 Tax=Ricinus communis RepID=B9SJV6_RICCO 2.0e-38
• FL-Next: sp=Protein argonaute 1; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Blast2go: protein argonaute 3.22299e-44
Internal
uagpf_v2_unigene42472 uagpf v2.0 187
• AutoFact: centromere/kinetochore protein ZW10 [Arabidopsis thaliana] sp|O48626.1|ZW10_ARATH RecName: Full=Centromere/kinetochore protein zw10 homolog gb|AAB88246.1| AtZW10 [Arabidopsis thaliana] gb|AAL47437.1| At2g32900/T21L14.16 [Arabidopsis thaliana] gb|AEC08759. 5.0e-14
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: centromere kinetochore protein zw10 homolog 0.0
Internal
uagpf_v2_unigene42479 uagpf v2.0 300
• AutoFact: BTB multi-domain protein 5.0e-26
• FL-Next: sp=ARM REPEAT PROTEIN INTERACTING WITH ABF2; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Blast2go: protein 0.0
Internal
uagpf_v2_unigene42483 uagpf v2.0 308
• AutoFact: Helix-loop-helix DNA-binding [Medicago truncatula] 5.0e-32
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: phytochrome-interacting factor 0.0
Internal
uagpf_v2_unigene42638 uagpf v2.0 297
• AutoFact: WRKY DNA-binding protein 21 [Arabidopsis thaliana] sp|O04336.1|WRK21_ARATH RecName: Full=Probable WRKY transcription factor 21; AltName: Full=WRKY DNA-binding protein 21 gb|AAK28441.1|AF272747_1 WRKY DNA-binding protein 21 [Arabidopsis thaliana] gb|AAB630 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: wrky dna-binding protein 21 0.0
Internal
uagpf_v2_unigene42690 uagpf v2.0 270
• AutoFact: guanine nucleotide exchange factor - like protein [Arabidopsis thaliana] 0.0
• FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
• Blast2go: brefeldin a-inhibited guanine nucleotide-exchange protein 1-like 0.0
Internal
uagpf_v2_unigene42706 uagpf v2.0 279
• AutoFact: Pathogenesis-related homeodomain protein [Arabidopsis thaliana] sp|P48785.1|PRH_ARATH RecName: Full=Pathogenesis-related homeodomain protein; Short=PRHA gb|AAA32843.1| homeodomain protein [Arabidopsis thaliana] gb|AAC49836.1| PRHA [Arabidopsis thaliana] e 1.0e-11
• FL-Next: sp=Pathogenesis-related homeodomain protein; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Blast2go: pathogenesis-related homeodomain protein 7.47012e-18
Internal
uagpf_v2_unigene42732 uagpf v2.0 281
• AutoFact: Histone deacetylase (Fragment) n=2 Tax=Malpighiales RepID=B9IEX4_POPTR 0.0
• FL-Next: sp=Histone deacetylase 19; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Blast2go: histone deacetylase 0.0
Putative N-terminus
uagpf_v2_unigene42789 uagpf v2.0 324
• AutoFact: DNA-directed RNA polymerase n=1 Tax=Physcomitrella patens subsp. patens RepID=A9RNX6_PHYPA 0.0
• FL-Next: sp=DNA-directed RNA polymerase II subunit RPB2; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Blast2go: protein 0.0
Internal
uagpf_v2_unigene42801 uagpf v2.0 314
• AutoFact: TPLATE protein [Arabidopsis thaliana] gb|AEE73713.1| TPLATE protein [Arabidopsis thaliana] 0.0
• FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
• Blast2go: tplate protein 0.0
Internal
uagpf_v2_unigene42821 uagpf v2.0 276
• AutoFact: transcription factor bHLH66 [Arabidopsis thaliana] sp|Q9ZUG9.1|BH066_ARATH RecName: Full=Transcription factor bHLH66; AltName: Full=Basic helix-loop-helix protein 66; Short=AtbHLH66; Short=bHLH 66; AltName: Full=Transcription factor EN 95; AltName: Full=b 9.94922e-44
• Blast2go: protein 0.0
unknown
uagpf_v2_unigene42958 uagpf v2.0 176
• AutoFact: Predicted protein n=2 Tax=Physcomitrella patens RepID=A9TKM8_PHYPA 0.0
• Blast2go: protein 0.0
unknown
uagpf_v2_unigene43094 uagpf v2.0 245
• AutoFact: Os12g0256300 protein n=6 Tax=Oryza sativa RepID=Q2QUQ9_ORYSJ 0.0
• FL-Next: tr=Predicted protein; subsp. trichocarpa). 0.0
• Blast2go: pre-mrna-splicing factor cwc-22 0.0
Internal
uagpf_v2_unigene43176 uagpf v2.0 144
• AutoFact: Transcription factor, putative n=1 Tax=Ricinus communis RepID=B9RJU4_RICCO 7.0e-08
• Blast2go: conserved peptide upstream open reading frame 37 0.0
unknown
uagpf_v2_unigene43216 uagpf v2.0 237
• AutoFact: small ubiquitin-related modifier 2 [Arabidopsis thaliana] sp|Q9FLP6.1|SUMO2_ARATH RecName: Full=Small ubiquitin-related modifier 2; Short=AtSUMO2 dbj|BAB08585.1| ubiquitin-like protein SMT3-like [Arabidopsis thaliana] gb|AAL91628.1| AT5g55160/MCO15_11 [Ar 2.0e-18
• Blast2go: ubiquitin-like protein smt3 1.12748e-23
unknown

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain