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Assembly Name: uagpf v2.0

Name: nucleus

Term: GO:0005634  Help

Source: GO from Blast2go

Ontology: Cellular Component


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
uagpf_v2_unigene2554 uagpf v2.0 593
AutoFact: Transcription factor n=1 Tax=Lycoris longituba RepID=D6MKH0_9ASPA 9.99967e-42
Blast2go: transcription factor hy5 0.0
unknown
uagpf_v2_unigene2561 uagpf v2.0 1090
AutoFact: DNA replication complex GINS protein PSF2 [Arabidopsis thaliana] sp|Q9C7A8.2|PSF2_ARATH RecName: Full=DNA replication complex GINS protein PSF2 gb|AAR24709.1| At3g12530 [Arabidopsis thaliana] gb|AAW80873.1| At3g12530 [Arabidopsis thaliana] gb|AEE75207.1| 0.0
FL-Next: sp=DNA replication complex GINS protein PSF2; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: dna replication complex gins protein psf2 0.0
Putative Complete
uagpf_v2_unigene2586 uagpf v2.0 1688
AutoFact: PREDICTED: similar to putative C-type U1 snRNP n=1 Tax=Vitis vinifera RepID=UPI00019837D4 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: u1 small nuclear ribonucleoprotein 0.0
Complete
uagpf_v2_unigene2618 uagpf v2.0 1612
AutoFact: inositol phosphate kinase [Glycine max] 0.0
FL-Next: sp=Inositol-tetrakisphosphate 1-kinase 2; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: inositol phosphate kinase 0.0
C-terminus
uagpf_v2_unigene2641 uagpf v2.0 1276
AutoFact: cullin 4 [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: ubiquitin-protein cullin 4 0.0
Complete
uagpf_v2_unigene2649 uagpf v2.0 380
AutoFact: Exosome complex exonuclease rrp45, putative n=1 Tax=Ricinus communis RepID=B9SYQ9_RICCO 0.0
Blast2go: 3 -5 -exoribonuclease cer7 protein 0.0
Putative coding
uagpf_v2_unigene2650 uagpf v2.0 993
AutoFact: Clathrin assembly protein, putative n=1 Tax=Ricinus communis RepID=B9RP36_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: clathrin assembly protein 0.0
N-terminus
uagpf_v2_unigene2668 uagpf v2.0 1056
AutoFact: Tbp-1 interacting protein, putative n=1 Tax=Ricinus communis RepID=B9ST09_RICCO 0.0
FL-Next: sp=Homologous-pairing protein 2 homolog; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: homologous-pairing protein 2 homolog 0.0
Complete
uagpf_v2_unigene2691 uagpf v2.0 617
AutoFact: Excision repair cross-complementing 1 ercc1, putative n=1 Tax=Ricinus communis RepID=B9RF25_RICCO 0.0
FL-Next: sp=DNA excision repair protein ERCC-1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: dna excision repair protein ercc-1 0.0
C-terminus
uagpf_v2_unigene2693 uagpf v2.0 1079
AutoFact: RecName: Full=Ornithine carbamoyltransferase, chloroplastic; AltName: Full=Ornithine transcarbamylase; Short=OTCase; Flags: Precursor gb|AAA74997.1| ornithine carbamoyltransferase [Pisum sativum] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: ornithine carbamoyltransferase 0.0
C-terminus
uagpf_v2_unigene2709 uagpf v2.0 994
AutoFact: Polcalcin Jun o 2 n=2 Tax=Cupressaceae RepID=POLC2_JUNOX 5.0e-40
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: calcium-binding pollen allergen 0.0
Complete
uagpf_v2_unigene2722 uagpf v2.0 489
AutoFact: cleavage and polyadenylation specificity factor subunit [Arabidopsis thaliana] 0.0
FL-Next: sp=Cleavage and polyadenylation specificity factor subunit 1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: cleavage and polyadenylation specificity factor subunit 1-like 0.0
N-terminus
uagpf_v2_unigene2727 uagpf v2.0 391
AutoFact: Transcription factor, putative n=1 Tax=Ricinus communis RepID=B9RRL5_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: transcription factor bhlh62-like 0.0
Internal
uagpf_v2_unigene2746 uagpf v2.0 454
AutoFact: AUX/IAA protein n=4 Tax=Solanum RepID=Q45UB0_SOLLC 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: aux iaa protein 0.0
Internal
uagpf_v2_unigene2753 uagpf v2.0 807
AutoFact: end binding protein 1C [Arabidopsis thaliana] dbj|BAB09646.1| unnamed protein product [Arabidopsis thaliana] gb|AAM65311.1| microtubule-associated protein EB1-like protein [Arabidopsis thaliana] dbj|BAD43258.1| unknown protein [Arabidopsis thaliana] gb|AB 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: microtubule-associated protein rp eb family member 1-like 0.0
C-terminus
uagpf_v2_unigene2773 uagpf v2.0 882
AutoFact: pfam03145, Sina, Seven in absentia protein family 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: ubiquitin ligase 0.0
N-terminus
uagpf_v2_unigene2774 uagpf v2.0 484
AutoFact: TGA-type basic leucine zipper protein TGA2.2 [Phaseolus vulgaris] 0.0
Blast2go: tga transcription factor 0.0
Coding
uagpf_v2_unigene2786 uagpf v2.0 880
AutoFact: Protein regulator of cytokinesis, putative n=1 Tax=Ricinus communis RepID=B9SYY2_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: microtubule-associated proteins 65-1 0.0
N-terminus
uagpf_v2_unigene2811 uagpf v2.0 759
AutoFact: transducin/WD-40 repeat-containing protein [Arabidopsis thaliana] gb|AAM13156.1| unknown protein [Arabidopsis thaliana] gb|AAN15609.1| unknown protein [Arabidopsis thaliana] gb|AEE29984.1| transducin/WD-40 repeat-containing protein [Arabidopsis thaliana] 0.0
FL-Next: sp=WD repeat-containing protein DWA2; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: transducin family protein 0.0
N-terminus
uagpf_v2_unigene2867 uagpf v2.0 444
AutoFact: RNA methylase HUA ENHANCER 1 [Arabidopsis thaliana] ref|NP_001190782.1| RNA methylase HUA ENHANCER 1 [Arabidopsis thaliana] sp|Q9C5Q8.1|HEN1_ARATH RecName: Full=Small RNA 2'-O-methyltransferase; AltName: Full=Protein CORYMBOSA 2; AltName: Full=Protein HUA 2.0e-18
Blast2go: rna methylase hua enhancer 1 8.36715e-42
unknown

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain