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Assembly Name: uagpf v2.0

Name: nucleus

Term: GO:0005634  Help

Source: GO from Blast2go

Ontology: Cellular Component


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
uagpf_v2_unigene1076 uagpf v2.0 590
AutoFact: uncharacterized protein [Arabidopsis thaliana] emb|CAA17156.1| hypothetical protein [Arabidopsis thaliana] emb|CAB79144.1| hypothetical protein [Arabidopsis thaliana] gb|AAX22254.1| At4g21890 [Arabidopsis thaliana] gb|ABF82621.1| At4g21890 [Arabidopsis th 9.0e-14
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: hypothetical protein ARALYDRAFT_492682 [Arabidopsis lyrata subsp. lyrata] 3.32709e-17
N-terminus
uagpf_v2_unigene1103 uagpf v2.0 337
AutoFact: amyloid beta precursor protein binding protein 1 [Arabidopsis thaliana] sp|P42744.1|ULA1_ARATH RecName: Full=NEDD8-activating enzyme E1 regulatory subunit; AltName: Full=Auxin-resistance protein AXR1 gb|AAB59348.1| ubiquitin-activating enzyme E1 [Arabidop 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: nedd8-activating enzyme e1 regulatory subunit 0.0
Putative N-terminus
uagpf_v2_unigene1107 uagpf v2.0 1800
AutoFact: 4-nitrophenylphosphatase, putative n=1 Tax=Ricinus communis RepID=B9RM24_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: haloacid dehalogenase-like hydrolase domain-containing protein 0.0
Complete
uagpf_v2_unigene1124 uagpf v2.0 1216
AutoFact: putative poly(A) polymerase [Oryza sativa Japonica Group] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: nuclear poly polymerase 0.0
C-terminus
uagpf_v2_unigene1133 uagpf v2.0 462
AutoFact: pheromone receptor, putative (AR401) [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: methyltransferase-like protein 10-like 0.0
N-terminus
uagpf_v2_unigene1136 uagpf v2.0 423
AutoFact: CDC27 domain containing protein 4.0e-06
Blast2go: dna-binding protein bin4 0.0
unknown
uagpf_v2_unigene1142 uagpf v2.0 621
AutoFact: uridylate kinase [Arabidopsis thaliana] dbj|BAB01794.1| unnamed protein product [Arabidopsis thaliana] gb|AAK92763.1| putative uridylate kinase [Arabidopsis thaliana] gb|AAM14100.1| putative uridylate kinase [Arabidopsis thaliana] gb|AEE76131.1| uridylate 0.0
FL-Next: tr=Putative uncharacterized protein; Zea mays (Maize). 0.0
Blast2go: uridylate kinase 0.0
Putative Complete
uagpf_v2_unigene1158 uagpf v2.0 601
AutoFact: protein tonneau 2 [Arabidopsis thaliana] gb|AAG35778.1|AF280057_1 tonneau 2 [Arabidopsis thaliana] gb|AAG35792.1|AF290025_1 tonneau 2 [Arabidopsis thaliana] gb|AAK26026.1|AF360316_1 unknown protein [Arabidopsis thaliana] gb|AAM44936.1| unknown protein [Ar 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: phosphatase subunit g4-1 0.0
C-terminus
uagpf_v2_unigene1219 uagpf v2.0 380
AutoFact: Histone H2A n=8 Tax=Picea sitchensis RepID=A9P2B3_PICSI 9.0e-26
Blast2go: histone h2a 1.93918e-30
unknown
uagpf_v2_unigene1246 uagpf v2.0 250
AutoFact: Putative methyl-binding domain protein n=1 Tax=Cryptomeria japonica RepID=Q1XG62_CRYJA 9.94922e-44
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: methyl-binding domain protein 0.0
N-terminus
uagpf_v2_unigene1253 uagpf v2.0 1222
AutoFact: PCF11P-similar protein 4 [Arabidopsis thaliana] dbj|BAF00997.1| hypothetical protein [Arabidopsis thaliana] gb|AEE82437.1| PCF11P-similar protein 4 [Arabidopsis thaliana] 0.0
Blast2go: protein 0.0
Coding
uagpf_v2_unigene1254 uagpf v2.0 664
AutoFact: DNA repair protein xp-E, putative n=1 Tax=Ricinus communis RepID=B9SKT9_RICCO 0.0
FL-Next: sp=DNA damage-binding protein 1; Solanum lycopersicum (Tomato) (Lycopersicon esculentum). 0.0
Blast2go: dna damage-binding protein 1a 0.0
C-terminus
uagpf_v2_unigene1276 uagpf v2.0 1028
AutoFact: deetiolated 1-like protein [Solanum tuberosum] 0.0
FL-Next: sp=Light-mediated development protein DET1; Solanum lycopersicum (Tomato) (Lycopersicon esculentum). 0.0
Blast2go: light-mediated development protein det1 0.0
C-terminus
uagpf_v2_unigene1316 uagpf v2.0 398
AutoFact: regulator of G-protein signaling 1 [Arabidopsis thaliana] gb|AAN12971.1| unknown protein [Arabidopsis thaliana] gb|AEE77116.1| regulator of G-protein signaling 1 [Arabidopsis thaliana] 0.0
FL-Next: tr=Signal transducer, putative; Ricinus communis (Castor bean). 0.0
Blast2go: regulator of g-protein signaling 1 0.0
Internal
uagpf_v2_unigene1337 uagpf v2.0 1422
AutoFact: RecName: Full=Acetylornithine aminotransferase, mitochondrial; Short=ACOAT; AltName: Full=Acetylornithine transaminase; Short=AOTA; Flags: Precursor emb|CAA69936.1| acetylornithine aminotransferase [Alnus glutinosa] 0.0
FL-Next: tr=Ornithine aminotransferase; Pinus sylvestris (Scots pine). 0.0
Blast2go: protein 0.0
Putative C-terminus
uagpf_v2_unigene1363 uagpf v2.0 681
AutoFact: Inducer of CBF expression 1 (Fragment) n=1 Tax=Picea abies RepID=B2KZF3_PICAB 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: transcription factor ice1 0.0
C-terminus
uagpf_v2_unigene1364 uagpf v2.0 578
AutoFact: D111/G-patch domain-containing protein [Arabidopsis thaliana] emb|CAB36744.1| hypothetical protein [Arabidopsis thaliana] emb|CAB79411.1| hypothetical protein [Arabidopsis thaliana] gb|ABI93912.1| At4g25020 [Arabidopsis thaliana] gb|AEE84992.1| D111/G-pat 1.0e-35
Blast2go: protein mos2-like 0.0
unknown
uagpf_v2_unigene1367 uagpf v2.0 771
AutoFact: U2 snrnp auxiliary factor, small subunit, putative n=2 Tax=rosids RepID=B9R8U8_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: splicing factor u2af 38 kda subunit 0.0
N-terminus
uagpf_v2_unigene1375 uagpf v2.0 860
AutoFact: Nucleic acid binding protein (Fragment) n=1 Tax=Cucumis melo subsp. melo RepID=E5GBX4_CUCME 0.0
FL-Next: sp=Probable lysine-specific demethylase ELF6; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: lysine-specific demethylase ref6-like 0.0
C-terminus
uagpf_v2_unigene1378 uagpf v2.0 459
AutoFact: Protein SENSITIVITY TO RED LIGHT REDUCED, putative n=1 Tax=Ricinus communis RepID=B9S4K4_RICCO 0.0
FL-Next: sp=Protein SENSITIVITY TO RED LIGHT REDUCED 1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: sensitivity to red light reduced protein 0.0
C-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain