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Assembly Name: uagpf v2.0

Name: nucleus

Term: GO:0005634  Help

Source: GO from Blast2go

Ontology: Cellular Component


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
uagpf_v2_unigene6940 uagpf v2.0 632
AutoFact: R2R3-MYB transcription factor MYB17 n=1 Tax=Picea glauca RepID=C0JTD6_PICGL 0.0
FL-Next: tr=R2R3-MYB transcription factor MYB5; Picea glauca (White spruce) (Pinus glauca). 0.0
Blast2go: r2r3-myb transcription factor myb10 0.0
N-terminus
uagpf_v2_unigene6955 uagpf v2.0 527
AutoFact: putative transcription initiation factor [Oryza sativa Japonica Group] gb|ABB46979.1| mutant TFIIF-alpha, putative, expressed [Oryza sativa Japonica Group] 2.0e-32
FL-Next: Isoform 2 of Transcription initiation factor IIF subunit alpha OS=Arabidopsis thaliana GN=RAP74 0.0
Blast2go: transcription initiation factor iif subunit alpha 7.42688e-44
C-terminus
uagpf_v2_unigene6982 uagpf v2.0 1340
AutoFact: Serine/threonine-protein phosphatase n=1 Tax=Picea sitchensis RepID=D5A9W9_PICSI 0.0
FL-Next: sp=Serine/threonine-protein phosphatase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: phosphoprotein phosphatase 0.0
Complete
uagpf_v2_unigene7002 uagpf v2.0 632
AutoFact: Putative F-box GID2 protein n=1 Tax=Selaginella moellendorffii RepID=A9LY18_SELML 5.0e-18
FL-Next: sp=F-box protein SNE; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: f-box protein sne 8.26759e-22
Complete
uagpf_v2_unigene7023 uagpf v2.0 509
AutoFact: putative methyltransferase PMT3 [Arabidopsis thaliana] ref|NP_001031639.1| putative methyltransferase PMT3 [Arabidopsis thaliana] sp|Q93YV7.1|PMT3_ARATH RecName: Full=Probable methyltransferase PMT3 gb|AAL24095.1| putative ankyrin protein [Arabidopsis tha 0.0
Blast2go: methyltransferase pmt3 0.0
Coding
uagpf_v2_unigene7032 uagpf v2.0 411
AutoFact: Unassigned protein
Blast2go: unknown [Picea sitchensis] 0.0
unknown
uagpf_v2_unigene7036 uagpf v2.0 532
AutoFact: putative adhesion regulating molecule family [Oryza sativa Japonica Group] dbj|BAG90710.1| unnamed protein product [Oryza sativa Japonica Group] dbj|BAG86665.1| unnamed protein product [Oryza sativa Japonica Group] gb|EEC79799.1| hypothetical protein OsI_ 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: regulatory particle non-atpase 13 0.0
N-terminus
uagpf_v2_unigene7100 uagpf v2.0 511
AutoFact: polyubiquitin 4 [Arabidopsis thaliana] ref|XP_002881273.1| hypothetical protein ARALYDRAFT_482268 [Arabidopsis lyrata subsp. lyrata] sp|P0CH32.1|UBQ4_ARATH RecName: Full=Polyubiquitin 4; Contains: RecName: Full=Ubiquitin; Flags: Precursor emb|CAA31331.1| 0.0
FL-Next: tr=Polyubiquitin; Pinus sylvestris (Scots pine). 0.0
Blast2go: ubiquitin 0.0
Putative N-terminus
uagpf_v2_unigene7104 uagpf v2.0 565
AutoFact: DEAD-box ATP-dependent RNA helicase 36 [Arabidopsis thaliana] sp|Q9SA27.1|RH36_ARATH RecName: Full=DEAD-box ATP-dependent RNA helicase 36 gb|AAD34681.1|AC006341_9 Similar to gb|L13612 DEAD-box protein (dbp45A) from Drosophila melanogaster and is a member 0.0
Blast2go: dead-box atp-dependent rna helicase 36-like 0.0
Putative coding
uagpf_v2_unigene7117 uagpf v2.0 969
AutoFact: Basic-leucine zipper transcription factor-like protein n=4 Tax=Arabidopsis RepID=B3H7M2_ARATH 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: bzip transcription factor 0.0
C-terminus
uagpf_v2_unigene7143 uagpf v2.0 695
AutoFact: [K] COG5190 TFIIF-interacting CTD phosphatases, including NLI-interacting factor 2.0e-07
FL-Next: sp=RNA polymerase II C-terminal domain phosphatase-like 3; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: rna polymerase ii c-terminal domain phosphatase-like 3-like 0.0
C-terminus
uagpf_v2_unigene7216 uagpf v2.0 455
AutoFact: putative xyloglucan glycosyltransferase 5 [Arabidopsis thaliana] sp|Q9SB75.1|CSLC5_ARATH RecName: Full=Probable xyloglucan glycosyltransferase 5; AltName: Full=Cellulose synthase-like protein C5; Short=AtCslC5 emb|CAA19764.1| putative protein [Arabidopsis 0.0
Blast2go: probable xyloglucan glycosyltransferase 5-like 0.0
unknown
uagpf_v2_unigene7273 uagpf v2.0 551
AutoFact: ASF/SF2-like pre-mRNA splicing factor SRP32' [Zea mays] 0.0
Blast2go: arginine serine-rich splicing 0.0
Coding
uagpf_v2_unigene7281 uagpf v2.0 966
AutoFact: Ocs element-binding factor, putative n=1 Tax=Ricinus communis RepID=B9R7Z2_RICCO 3.0e-16
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: ocs element-binding 0.0
N-terminus
uagpf_v2_unigene7341 uagpf v2.0 526
AutoFact: protein tonneau 2 [Arabidopsis thaliana] gb|AAG35778.1|AF280057_1 tonneau 2 [Arabidopsis thaliana] gb|AAG35792.1|AF290025_1 tonneau 2 [Arabidopsis thaliana] gb|AAK26026.1|AF360316_1 unknown protein [Arabidopsis thaliana] gb|AAM44936.1| unknown protein [Ar 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: phosphatase subunit g4-1 0.0
N-terminus
uagpf_v2_unigene7361 uagpf v2.0 345
AutoFact: DNA-binding protein PcMYB1, putative [Arabidopsis thaliana] 0.0
Blast2go: telomere repeat binding factor 1 0.0
unknown
uagpf_v2_unigene7372 uagpf v2.0 483
AutoFact: SPINDLY n=1 Tax=Sinningia speciosa RepID=B5AY31_9LAMI 0.0
FL-Next: sp=Probable UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase SPINDLY; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: protein 0.0
Putative N-terminus
uagpf_v2_unigene7403 uagpf v2.0 547
AutoFact: transcription regulator [Arabidopsis thaliana] gb|AAL86308.1| unknown protein [Arabidopsis thaliana] gb|AAM67542.1| unknown protein [Arabidopsis thaliana] gb|AED91870.1| transcription regulator [Arabidopsis thaliana] 0.0
Blast2go: protein 0.0
Putative coding
uagpf_v2_unigene7406 uagpf v2.0 961
AutoFact: Ethylene response factor 1 n=1 Tax=Cucumis sativus RepID=Q5S004_CUCSA 4.0e-14
Blast2go: ethylene-responsive element binding factor-like protein 1.6707e-15
unknown
uagpf_v2_unigene7477 uagpf v2.0 474
AutoFact: Auxin-induced protein 2 n=2 Tax=Pinus RepID=Q7XYT5_PINTA 0.0
FL-Next: tr=Putative auxin induced transcription factor Aux/IAA; Pinus pinaster (Maritime pine). 0.0
Blast2go: auxin-responsive protein 0.0
N-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain