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Assembly Name: uagpf v2.0

Name: nucleus

Term: GO:0005634  Help

Source: GO from Blast2go

Ontology: Cellular Component


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
uagpf_v2_unigene6569 uagpf v2.0 1174
AutoFact: bZIP transcription factor bZIP28 [Glycine max] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: basic leucine zipper transcription factor-like protein 0.0
C-terminus
uagpf_v2_unigene6575 uagpf v2.0 362
AutoFact: RNA polymerase II assessory factor Cdc73p n=1 Tax=Physcomitrella patens subsp. patens RepID=A9RKF9_PHYPA 2.0e-36
FL-Next: tr=RNA polymerase II assessory factor Cdc73p; Physcomitrella patens subsp. patens (Moss). 0.0
Blast2go: rna polymerase ii assessory factor cdc73p 5.56315e-43
N-terminus
uagpf_v2_unigene6585 uagpf v2.0 767
AutoFact: Clathrin assembly protein, putative n=1 Tax=Ricinus communis RepID=B9RP36_RICCO 0.0
FL-Next: sp=Probable clathrin assembly protein At4g32285; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: clathrin assembly protein 0.0
Putative C-terminus
uagpf_v2_unigene6618 uagpf v2.0 765
AutoFact: cyclin-dependent kinase F-1 [Arabidopsis thaliana] ref|NP_849468.1| cyclin-dependent kinase F-1 [Arabidopsis thaliana] sp|O80345.1|CDKF1_ARATH RecName: Full=Cyclin-dependent kinase F-1; Short=CDKF;1; AltName: Full=CDK-activating kinase 1-At; Short=CAK1-At 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: cyclin-dependent kinase f-1 0.0
C-terminus
uagpf_v2_unigene6665 uagpf v2.0 1625
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
N-terminus
uagpf_v2_unigene6672 uagpf v2.0 929
AutoFact: Xenotropic and polytropic murine leukemia virus receptor ids-4, putative n=1 Tax=Ricinus communis RepID=B9SES9_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: spx domain-containing protein 2 0.0
N-terminus
uagpf_v2_unigene6679 uagpf v2.0 493
AutoFact: Ethylene transcription factor n=2 Tax=Fagus sylvatica RepID=Q70AB2_FAGSY 6.0e-19
Blast2go: ap2 domain containing protein 2.25605e-23
unknown
uagpf_v2_unigene6680 uagpf v2.0 1676
AutoFact: ADP-ribosylation factor 3 n=21 Tax=Magnoliophyta RepID=ARF3_ARATH 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: adp-ribosylation factor 3 0.0
Complete
uagpf_v2_unigene6699 uagpf v2.0 754
AutoFact: Drought responsive element binding protein 2 n=3 Tax=Glycine max RepID=C5IU97_SOYBN 1.0e-30
Blast2go: dehydration-responsive element binding protein 2 1.38465e-38
unknown
uagpf_v2_unigene6764 uagpf v2.0 909
AutoFact: Zinc finger CCCH domain-containing protein 35 n=2 Tax=Oryza sativa RepID=C3H35_ORYSJ 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
N-terminus
uagpf_v2_unigene6767 uagpf v2.0 1928
AutoFact: Pyruvate dehydrogenase, putative n=1 Tax=Ricinus communis RepID=B9S2H9_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: pyruvate dehydrogenase e1 alpha subunit 0.0
Complete
uagpf_v2_unigene6778 uagpf v2.0 766
AutoFact: SWI/SNF complex subunit SWI3C [Arabidopsis thaliana] sp|Q9XI07.1|SWI3C_ARATH RecName: Full=SWI/SNF complex subunit SWI3C; Short=AtSWI3C; AltName: Full=Transcription regulatory protein SWI3C gb|AAD41423.1|AC007727_12 Contains similarity to gb|AF033823 moir 0.0
FL-Next: sp=SWI/SNF complex subunit SWI3C; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: swi snf complex subunit swi3c-like 0.0
Putative C-terminus
uagpf_v2_unigene6783 uagpf v2.0 791
AutoFact: TauD domain containing protein 4.0e-28
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: clavaminate synthase-like protein 0.0
C-terminus
uagpf_v2_unigene6799 uagpf v2.0 854
AutoFact: dual specificity protein phosphatase 1 [Arabidopsis thaliana] emb|CAA77232.1| DsPTP1 protein [Arabidopsis thaliana] gb|AEE76784.1| dual specificity protein phosphatase 1 [Arabidopsis thaliana] 0.0
Blast2go: dual specificity protein phosphatase 1 0.0
unknown
uagpf_v2_unigene6809 uagpf v2.0 1041
AutoFact: Homeobox protein, putative n=1 Tax=Ricinus communis RepID=B9R943_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: homeobox-leucine zipper protein hat5-like 0.0
N-terminus
uagpf_v2_unigene6850 uagpf v2.0 804
AutoFact: Transcription factor, putative n=1 Tax=Ricinus communis RepID=B9SGW9_RICCO 9.80909e-45
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: two-component response regulator ehd1 0.0
N-terminus
uagpf_v2_unigene6872 uagpf v2.0 759
AutoFact: centromere protein O [Arabidopsis thaliana] ref|NP_850804.1| centromere protein O [Arabidopsis thaliana] gb|AAN86147.1| unknown protein [Arabidopsis thaliana] gb|AED91585.1| centromere protein O [Arabidopsis thaliana] gb|AED91586.1| centromere protein O [ 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: centromere protein o 0.0
N-terminus
uagpf_v2_unigene6900 uagpf v2.0 385
AutoFact: Transcriptional factor TINY, putative n=1 Tax=Ricinus communis RepID=B9RQZ6_RICCO 3.0e-26
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: ap2 erf domain-containing transcription factor 0.0
N-terminus
uagpf_v2_unigene6913 uagpf v2.0 735
AutoFact: homeodomain-leucine zipper protein 56 [Glycine max] 8.00001e-41
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: homeobox-leucine zipper protein athb-6-like 0.0
Putative N-terminus
uagpf_v2_unigene6937 uagpf v2.0 539
AutoFact: protein tonneau 2 [Arabidopsis thaliana] gb|AAG35778.1|AF280057_1 tonneau 2 [Arabidopsis thaliana] gb|AAG35792.1|AF290025_1 tonneau 2 [Arabidopsis thaliana] gb|AAK26026.1|AF360316_1 unknown protein [Arabidopsis thaliana] gb|AAM44936.1| unknown protein [Ar 0.0
Blast2go: phosphatase subunit g4-1 0.0
unknown

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain