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Assembly Name: uagpf v2.0

Name: nucleus

Term: GO:0005634  Help

Source: GO from Blast2go

Ontology: Cellular Component

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
uagpf_v2_unigene5595 uagpf v2.0 820
• AutoFact: pfam00400, WD40, WD domain, G-beta repeat 3.0e-07
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: transcriptional corepressor leunig 0.0
Complete
uagpf_v2_unigene5596 uagpf v2.0 919
• AutoFact: translation initiation factor 3 subunit B [Arabidopsis thaliana] sp|Q9C5Z1.1|EIF3B_ARATH RecName: Full=Eukaryotic translation initiation factor 3 subunit B; Short=eIF3b; AltName: Full=eIF-3-eta; AltName: Full=eIF3 p110; AltName: Full=p82 gb|AAG53615.1|AF2 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: eukaryotic translation initiation factor 3 subunit b-like 0.0
N-terminus
uagpf_v2_unigene5604 uagpf v2.0 367
• AutoFact: Heat shock protein DnaJ [Medicago truncatula] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: chaperone protein dnaj 6 0.0
C-terminus
uagpf_v2_unigene5608 uagpf v2.0 687
• AutoFact: Homeobox transcription factor SKN2 n=3 Tax=Pinaceae RepID=Q9ZR90_PICMA 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: homeobox transcription factor kn2 0.0
C-terminus
uagpf_v2_unigene5614 uagpf v2.0 2230
• AutoFact: splicing factor 3A subunit 3 [Arabidopsis thaliana] dbj|BAB09681.1| splicing factor 3a [Arabidopsis thaliana] gb|AAK64048.1| putative splicing factor 3a [Arabidopsis thaliana] gb|AAM44910.1| putative splicing factor 3a protein [Arabidopsis thaliana] gb|AE 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: splicing factor 3a subunit 3-like 0.0
Complete
uagpf_v2_unigene5651 uagpf v2.0 996
• AutoFact: Heat shock 70 kDa protein, putative n=1 Tax=Ricinus communis RepID=B9SQC9_RICCO 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: heat shock protein 91 0.0
N-terminus
uagpf_v2_unigene5662 uagpf v2.0 499
• AutoFact: Eukaryotic translation initiation factor 3 subunit B n=1 Tax=Nicotiana tabacum RepID=EIF3B_TOBAC 5.0e-40
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: eukaryotic translation initiation factor 3 subunit b 0.0
N-terminus
uagpf_v2_unigene5711 uagpf v2.0 575
• AutoFact: Phytochrome A-associated F-box protein, putative n=1 Tax=Ricinus communis RepID=B9SAQ8_RICCO 0.0
• Blast2go: phytochrome a-associated f-box protein 0.0
unknown
uagpf_v2_unigene5744 uagpf v2.0 509
• AutoFact: cyclin H-1 [Oryza sativa Japonica Group] 0.0
• Blast2go: cyclin h-1 0.0
unknown
uagpf_v2_unigene5786 uagpf v2.0 388
• AutoFact: Protein kinase [Medicago truncatula] 0.0
• Blast2go: protein kinase 0.0
Putative coding
uagpf_v2_unigene5844 uagpf v2.0 1329
• AutoFact: Type A response regulator RR1 n=1 Tax=Phaseolus vulgaris RepID=B0YGG5_PHAVU 4.0e-38
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: type a response regulator 0.0
Complete
uagpf_v2_unigene5855 uagpf v2.0 524
• AutoFact: F-box protein 7 n=2 Tax=Arabidopsis RepID=SKI32_ARATH 0.0
• FL-Next: sp=F-box protein 7; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Blast2go: f-box protein 0.0
N-terminus
uagpf_v2_unigene5876 uagpf v2.0 877
• AutoFact: Hexokinase n=1 Tax=Citrus sinensis RepID=Q9FVD3_CITSI 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: hexokinase 1 0.0
C-terminus
uagpf_v2_unigene5884 uagpf v2.0 556
• AutoFact: ketose-bisphosphate aldolase class-II-like protein [Arabidopsis thaliana] gb|AAL60010.1| unknown protein [Arabidopsis thaliana] gb|AAM91809.1| unknown protein [Arabidopsis thaliana] gb|AEE29694.1| ketose-bisphosphate aldolase class-II-like protein [Arabid 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: ketose-bisphosphate aldolase class-ii-like protein 0.0
N-terminus
uagpf_v2_unigene5891 uagpf v2.0 1128
• AutoFact: Proteasome subunit alpha type n=1 Tax=Picea sitchensis RepID=A9NK23_PICSI 0.0
• FL-Next: sp=Proteasome subunit alpha type; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: proteasome subunit alpha type 5 0.0
Complete
uagpf_v2_unigene5899 uagpf v2.0 1548
• AutoFact: floral homeotic protein HUA1 [Arabidopsis thaliana] 0.0
• FL-Next: sp=Phospholipase D; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: zinc finger ccch domain-containing protein 37 0.0
Internal
uagpf_v2_unigene5909 uagpf v2.0 963
• AutoFact: smad nuclear-interacting protein 1 [Arabidopsis thaliana] sp|Q8W4D8.1|DDL_ARATH RecName: Full=FHA domain-containing protein DDL; AltName: Full=Protein DAWDLE gb|AAL32704.1| Unknown protein [Arabidopsis thaliana] gb|AAN15324.1| Unknown protein [Arabidopsis 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: fha domain-containing protein ddl 0.0
C-terminus
uagpf_v2_unigene5910 uagpf v2.0 571
• AutoFact: 30S ribosomal protein S5, putative n=1 Tax=Ricinus communis RepID=B9RBC3_RICCO 1.96182e-44
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: 30s ribosomal protein s5 0.0
N-terminus
uagpf_v2_unigene5938 uagpf v2.0 1119
• AutoFact: Putative alpha subunit of F-actin capping protein n=2 Tax=Oryza sativa RepID=Q8H358_ORYSJ 0.0
• FL-Next: sp=F-actin-capping protein subunit alpha; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Blast2go: alpha subunit of f-actin capping protein 0.0
C-terminus
uagpf_v2_unigene5942 uagpf v2.0 481
• AutoFact: Inositol hexaphosphate kinase, putative n=1 Tax=Ricinus communis RepID=B9RA37_RICCO 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: inositol polyphosphate multikinase alpha 0.0
C-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain