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Assembly Name: uagpf v2.0

Name: nucleus

Term: GO:0005634  Help

Source: GO from Blast2go

Ontology: Cellular Component

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
uagpf_v2_unigene4014 uagpf v2.0 603
• AutoFact: mitotic cyclin a2-type [Glycine max] 6.0e-40
• FL-Next: Isoform 2 of Cyclin-A1-3 OS=Oryza sativa subsp. japonica GN=CYCA1-3 0.0
• Blast2go: protein 0.0
C-terminus
uagpf_v2_unigene4020 uagpf v2.0 1483
• AutoFact: Kelch repeat containing protein n=3 Tax=Oryza sativa RepID=Q6ZXK6_ORYSJ 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: nitrile-specifier protein 5-like 0.0
Complete
uagpf_v2_unigene4022 uagpf v2.0 851
• AutoFact: YDG_SRA multi-domain protein 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: zinc finger 0.0
Internal
uagpf_v2_unigene4032 uagpf v2.0 244
• AutoFact: DnaJ-like protein isoform n=1 Tax=Solanum phureja RepID=Q0GA60_9SOLN 1.0e-34
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: like protein 0.0
C-terminus
uagpf_v2_unigene4049 uagpf v2.0 1470
• AutoFact: EREBP-3 homolog n=2 Tax=Stylosanthes hamata RepID=Q9ZR83_STYHA 2.0e-17
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: ethylene-responsive element binding factor-like protein 7.20587e-20
Putative C-terminus
uagpf_v2_unigene4060 uagpf v2.0 484
• AutoFact: SET domain protein n=1 Tax=Populus trichocarpa RepID=B9H7V1_POPTR 0.0
• FL-Next: sp=Histone-lysine N-methyltransferase ASHH1; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Blast2go: histone-lysine n-methyltransferase ashh1-like 0.0
C-terminus
uagpf_v2_unigene4067 uagpf v2.0 797
• AutoFact: NAD(P)-linked oxidoreductase-like protein [Arabidopsis thaliana] sp|Q84TF0.1|AKRCA_ARATH RecName: Full=Aldo-keto reductase family 4 member C10 gb|AAO64797.1| At2g37790 [Arabidopsis thaliana] dbj|BAE99364.1| putative alcohol dehydrogenase [Arabidopsis thal 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: aldo-keto reductase family 4 member c9-like 0.0
N-terminus
uagpf_v2_unigene4101 uagpf v2.0 962
• AutoFact: E3 ubiquitin protein ligase DRIP1 [Arabidopsis thaliana] gb|ACF28393.1| At1g06770 [Arabidopsis thaliana] gb|AEE28034.1| E3 ubiquitin protein ligase DRIP1 [Arabidopsis thaliana] 8.0e-18
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: e3 ubiquitin protein ligase drip2-like 1.88799e-27
C-terminus
uagpf_v2_unigene4142 uagpf v2.0 539
• AutoFact: protein-tyrosine-phosphatase IBR5 [Arabidopsis thaliana] sp|Q84JU4.1|IBR5_ARATH RecName: Full=Protein-tyrosine-phosphatase IBR5; AltName: Full=Protein INDOLE-3-BUTYRIC ACID RESPONSE 5; Short=Protein IBA RESPONSE 5; AltName: Full=SKP1-interacting partner 3 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: protein-tyrosine-phosphatase ibr5 0.0
N-terminus
uagpf_v2_unigene4146 uagpf v2.0 500
• AutoFact: Polyketide_cyc2 domain containing protein 4.0e-09
• Blast2go: abscisic acid receptor pyl8 0.0
unknown
uagpf_v2_unigene4157 uagpf v2.0 1611
• AutoFact: Putative MYB transcription factor n=1 Tax=Rosa rugosa RepID=F2QKV9_ROSRU 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: myb family transcription factor 0.0
C-terminus
uagpf_v2_unigene4203 uagpf v2.0 841
• AutoFact: flag-tagged protein kinase domain of putative mitogen-activated protein kinase kinase kinase [synthetic construct] 0.0
• Blast2go: serine threonine-protein kinase ht1-like 0.0
unknown
uagpf_v2_unigene4230 uagpf v2.0 1420
• AutoFact: Huntingtin interacting protein, putative n=1 Tax=Ricinus communis RepID=B9S2T8_RICCO 1.0e-28
• Blast2go: histone-lysine n-methyltransferase ashh2-like 1.01747e-33
unknown
uagpf_v2_unigene4246 uagpf v2.0 896
• AutoFact: Histidine-containing phosphotransfer protein n=1 Tax=Catharanthus roseus RepID=Q94KS0_CATRO 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: histidine-containing phosphotransfer 0.0
C-terminus
uagpf_v2_unigene4252 uagpf v2.0 296
• AutoFact: Protein FAM50A, putative n=2 Tax=fabids RepID=B9STC7_RICCO 7.0e-29
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: protein xap5 circadian timekeeper 3.92848e-35
N-terminus
uagpf_v2_unigene4268 uagpf v2.0 554
• AutoFact: protein pleiotropic regulatory locus 1 [Arabidopsis thaliana] sp|Q42384.1|PRL1_ARATH RecName: Full=Protein pleiotropic regulatory locus 1; Short=Protein PRL1; AltName: Full=MOS4-associated complex protein 2; Short=MAC protein 2 emb|CAA58031.1| PRL1 [Arabi 0.0
• FL-Next: tr=Os03g0339100 protein; Oryza sativa subsp. japonica (Rice). 0.0
• Blast2go: protein pleiotropic regulatory locus 1-like 0.0
N-terminus
uagpf_v2_unigene4278 uagpf v2.0 431
• AutoFact: Putative MYB transcription factor n=1 Tax=Rosa rugosa RepID=F2QKV9_ROSRU 0.0
• Blast2go: myb family transcription factor 0.0
unknown
uagpf_v2_unigene4305 uagpf v2.0 633
• AutoFact: Interferon-related developmental regulator domain-containing protein [Arabidopsis thaliana] gb|AEE30875.1| Interferon-related developmental regulator domain-containing protein [Arabidopsis thaliana] 0.0
• Blast2go: interferon-related developmental regulator domain-containing protein 0.0
Putative coding
uagpf_v2_unigene4319 uagpf v2.0 1101
• AutoFact: myb family transcription factor [Arabidopsis thaliana] gb|AAD25661.1| hypothetical protein [Arabidopsis thaliana] gb|AEC09803.1| myb family transcription factor [Arabidopsis thaliana] 7.0e-21
• FL-Next: sp=Putative Myb family transcription factor At1g14600; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Blast2go: protein 2.26367e-28
Complete
uagpf_v2_unigene4423 uagpf v2.0 571
• AutoFact: Helix-loop-helix DNA-binding n=2 Tax=Medicago truncatula RepID=Q2HVX8_MEDTR 0.0
• Blast2go: protein 0.0
Putative coding

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain