Sustainpine_db
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Assembly Name: uagpf v2.0

Name: nucleus

Term: GO:0005634  Help

Source: GO from Blast2go

Ontology: Cellular Component


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
uagpf_v2_unigene3648 uagpf v2.0 1139
AutoFact: bud site selection protein 31 [Arabidopsis thaliana] ref|XP_002869907.1| G10 family protein [Arabidopsis lyrata subsp. lyrata] gb|AAK95313.1|AF410327_1 AT4g21110/F7J7_50 [Arabidopsis thaliana] emb|CAA17530.1| G10-like protein [Arabidopsis thaliana] emb|CA 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
Putative Complete
uagpf_v2_unigene3658 uagpf v2.0 1101
AutoFact: Putative serine/threonine kinase n=2 Tax=rosids RepID=Q84U32_VITVI 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: serine threonine kinase 0.0
Complete
uagpf_v2_unigene3673 uagpf v2.0 550
AutoFact: Aberrant root formation protein, putative n=1 Tax=Ricinus communis RepID=B9RNZ2_RICCO 1.0e-14
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: aberrant root formation protein 2.54024e-33
C-terminus
uagpf_v2_unigene3687 uagpf v2.0 926
AutoFact: DELLA domain GRAS family transcription factor rga-like protein n=2 Tax=Populus trichocarpa RepID=B9GV61_POPTR 0.0
FL-Next: tr=SCARECROW; Pinus sylvestris (Scots pine). 0.0
Blast2go: della protein 0.0
Internal
uagpf_v2_unigene3725 uagpf v2.0 407
AutoFact: NAC domain-containing protein 78 [Arabidopsis thaliana] sp|Q84K00.2|NAC78_ARATH RecName: Full=NAC domain-containing protein 78; Short=ANAC078 emb|CAB85547.1| putative protein [Arabidopsis thaliana] gb|AAM20460.1| putative protein [Arabidopsis thaliana] gb 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: nac domain ipr003441 0.0
Internal
uagpf_v2_unigene3739 uagpf v2.0 626
AutoFact: transcription factor, putative 0.0
Blast2go: two-component response regulator arr 0.0
unknown
uagpf_v2_unigene3748 uagpf v2.0 1438
AutoFact: succinate dehydrogenase 5 [Arabidopsis thaliana] sp|Q9SX77.1|UMP6_ARATH RecName: Full=Uncharacterized protein At1g47420, mitochondrial; Flags: Precursor gb|AAD46040.1|AC007519_25 ESTs gb|H36253 and gb|AA04251 come from this gene [Arabidopsis thaliana] gb| 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: succinate dehydrogenase 5 0.0
Complete
uagpf_v2_unigene3758 uagpf v2.0 836
AutoFact: Bromodomain-containing protein, putative n=1 Tax=Ricinus communis RepID=B9SUQ2_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: global transcription factor group 0.0
N-terminus
uagpf_v2_unigene3779 uagpf v2.0 811
AutoFact: cyclin B1 [Allium cepa] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: cyclin b1 0.0
C-terminus
uagpf_v2_unigene3788 uagpf v2.0 571
AutoFact: Myb-related transcription factor n=1 Tax=Solanum lycopersicum RepID=Q40173_SOLLC 0.0
Blast2go: myb-related transcription factor 0.0
Putative coding
uagpf_v2_unigene3899 uagpf v2.0 639
AutoFact: DNA polymerase delta p66 subunit-like n=2 Tax=Oryza sativa RepID=Q5QNL2_ORYSJ 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: dna-directed dna polymerase 0.0
N-terminus
uagpf_v2_unigene3912 uagpf v2.0 1315
AutoFact: Tubulin-specific chaperone B, putative n=1 Tax=Ricinus communis RepID=B9ST41_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: tubulin folding cofactor b 0.0
Putative Complete
uagpf_v2_unigene3913 uagpf v2.0 1238
AutoFact: putative 5-3 exoribonuclease [Oryza sativa Japonica Group] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: 5 -3 exoribonuclease 3-like 0.0
Putative N-terminus
uagpf_v2_unigene3939 uagpf v2.0 1762
AutoFact: protein ULTRAPETALA 1 [Arabidopsis thaliana] sp|Q8GZA8.1|ULT1_ARATH RecName: Full=Protein ULTRAPETALA 1 dbj|BAC41785.1| unknown protein [Arabidopsis thaliana] gb|ABH04520.1| At4g28190 [Arabidopsis thaliana] gb|AEE85451.1| protein ULTRAPETALA 1 [Arabidopsi 0.0
FL-Next: sp=Protein ULTRAPETALA 1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: protein ultrapetala 1 0.0
Complete
uagpf_v2_unigene3943 uagpf v2.0 1045
AutoFact: Transcription factor, putative n=1 Tax=Ricinus communis RepID=B9RJU4_RICCO 6.0e-12
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: conserved peptide upstream open reading frame 37 0.0
C-terminus
uagpf_v2_unigene3955 uagpf v2.0 462
AutoFact: putative DNA-binding protein [Arabidopsis thaliana] emb|CAB77810.1| putative DNA-binding protein [Arabidopsis thaliana] emb|CAD29664.1| homeodomain protein 14 [Arabidopsis thaliana] gb|ABH04479.1| At4g03250 [Arabidopsis thaliana] 3.0e-33
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: homeobox-leucine zipper family protein 0.0
Internal
uagpf_v2_unigene3961 uagpf v2.0 1447
AutoFact: contains similarity to human PCF11p homolog (GB:AF046935) [Arabidopsis thaliana] 0.0
Blast2go: protein 0.0
Coding
uagpf_v2_unigene3984 uagpf v2.0 793
AutoFact: pfam04146, YTH, YT521-B-like domain 0.0
FL-Next: tr=Yth domain-containing protein, putative; Ricinus communis (Castor bean). 0.0
Blast2go: uncharacterized protein 0.0
N-terminus
uagpf_v2_unigene4004 uagpf v2.0 611
AutoFact: PGAP1 domain containing protein 9.0e-05
FL-Next: tr=Putative uncharacterized protein; Ricinus communis (Castor bean). 0.0
Blast2go: uncharacterized protein loc100247423 0.0
C-terminus
uagpf_v2_unigene4009 uagpf v2.0 696
AutoFact: RecName: Full=Pirin-like protein gb|AAF22236.1|AF154003_1 pirin [Solanum lycopersicum] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: pirin-like protein 0.0
N-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain