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Assembly Name: uagpf v2.0

Name: DNA binding

Term: GO:0003677  Help

Source: GO from Blast2go

Ontology: Molecular Function


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
uagpf_v2_unigene8035 uagpf v2.0 595
AutoFact: response regulator 8 [Zea mays] dbj|BAB41137.1| response regulator 8 [Zea mays] gb|ACG47663.1| two-component response regulator ARR1 [Zea mays] 0.0
Blast2go: type-b response regulator 0.0
unknown
uagpf_v2_unigene8043 uagpf v2.0 458
AutoFact: phosphatase like protein [Arabidopsis thaliana] emb|CAB78583.1| phosphatase like protein [Arabidopsis thaliana] 0.0
FL-Next: sp=Serine/threonine protein phosphatase 2A 59 kDa regulatory subunit B' eta isoform; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: protein 0.0
Internal
uagpf_v2_unigene8059 uagpf v2.0 736
AutoFact: Zinc finger protein, putative n=1 Tax=Ricinus communis RepID=B9SC24_RICCO 0.0
FL-Next: tr=Zinc finger protein, putative; Ricinus communis (Castor bean). 0.0
Blast2go: protein 0.0
Internal
uagpf_v2_unigene8103 uagpf v2.0 523
AutoFact: transcription factor DP1 [Populus tremula x Populus tremuloides] gb|AAP73785.1| DP1 [Populus tremula x Populus tremuloides] 0.0
Blast2go: transcription factor e2 dimerization partner protein 0.0
unknown
uagpf_v2_unigene8109 uagpf v2.0 453
AutoFact: vacuolar protein sorting-associated protein 72 [Arabidopsis thaliana] gb|AEC09293.1| vacuolar protein sorting-associated protein 72 [Arabidopsis thaliana] 4.0e-27
Blast2go: vacuolar protein sorting-associated protein 72 homolog 8.14877e-34
unknown
uagpf_v2_unigene8120 uagpf v2.0 812
AutoFact: Zinc finger protein, putative n=1 Tax=Ricinus communis RepID=B9SC24_RICCO 0.0
FL-Next: tr=Zinc finger protein, putative; Ricinus communis (Castor bean). 0.0
Blast2go: protein 0.0
Internal
uagpf_v2_unigene8186 uagpf v2.0 878
AutoFact: Histone H2A n=2 Tax=Physcomitrella patens subsp. patens RepID=A9S412_PHYPA 0.0
FL-Next: sp=Histone H2A; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: histone 2 0.0
Complete
uagpf_v2_unigene8209 uagpf v2.0 523
AutoFact: Ebs-bah-phd domain-containing protein n=7 Tax=Magnoliophyta RepID=B9IAJ0_POPTR 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: ebs-bah-phd domain-containing protein 0.0
N-terminus
uagpf_v2_unigene8222 uagpf v2.0 806
AutoFact: exocyst complex component 5 [Arabidopsis thaliana] ref|NP_568270.3| exocyst complex component 5 [Arabidopsis thaliana] sp|Q8RVQ5.2|EXOC5_ARATH RecName: Full=Exocyst complex component 5; AltName: Full=Exocyst complex component Sec10 dbj|BAD95324.1| putativ 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: exocyst complex component 5 0.0
C-terminus
uagpf_v2_unigene8242 uagpf v2.0 641
AutoFact: Transcription factor, putative n=1 Tax=Ricinus communis RepID=B9SGW9_RICCO 9.80909e-45
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: two-component response regulator ehd1 0.0
C-terminus
uagpf_v2_unigene8439 uagpf v2.0 597
AutoFact: DNA polymerase n=1 Tax=Ricinus communis RepID=B9SC90_RICCO 0.0
FL-Next: sp=DNA polymerase alpha catalytic subunit; Oryza sativa subsp. japonica (Rice). 0.0
Blast2go: dna polymerase alpha catalytic 0.0
Internal
uagpf_v2_unigene8478 uagpf v2.0 434
AutoFact: [L] COG1241 Predicted ATPase involved in replication control, Cdc46/Mcm family 0.0
Blast2go: minichromosome maintenance protein 0.0
unknown
uagpf_v2_unigene8534 uagpf v2.0 795
AutoFact: Transcription factor, putative n=1 Tax=Ricinus communis RepID=B9SGW9_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: myb-cc type transfactor 0.0
N-terminus
uagpf_v2_unigene8581 uagpf v2.0 315
AutoFact: Helicase, C-terminal; Argonaute and Dicer protein, PAZ; Ribonuclease III, bacterial [Medicago truncatula] 0.0
FL-Next: sp=Endoribonuclease Dicer homolog 1; Oryza sativa subsp. japonica (Rice). 0.0
Blast2go: endoribonuclease dicer homolog 1-like 0.0
Internal
uagpf_v2_unigene8613 uagpf v2.0 388
AutoFact: DNA-directed RNA polymerase (Fragment) n=10 Tax=Spermatophyta RepID=Q2TUN6_GINBI 0.0
FL-Next: sp=DNA-directed RNA polymerase II subunit RPB1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: rna polymerase ii largest subunit 0.0
Internal
uagpf_v2_unigene8682 uagpf v2.0 788
AutoFact: Ethylene transcription factor n=2 Tax=Fagus sylvatica RepID=Q70AB2_FAGSY 6.0e-19
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: ap2 domain containing protein 2.25605e-23
N-terminus
uagpf_v2_unigene8709 uagpf v2.0 552
AutoFact: Transcription factor, putative n=1 Tax=Ricinus communis RepID=B9SQC7_RICCO 2.0e-19
Blast2go: protein 1.45455e-42
unknown
uagpf_v2_unigene8847 uagpf v2.0 333
AutoFact: CHD3-type chromatin-remodeling factor PICKLE [Arabidopsis thaliana] sp|Q9S775.1|PKL_ARATH RecName: Full=CHD3-type chromatin-remodeling factor PICKLE; AltName: Full=Protein GYMNOS gb|AAF07084.1|AF185578_1 GYMNOS/PICKLE [Arabidopsis thaliana] gb|AAF13875.1| 0.0
FL-Next: sp=CHD3-type chromatin-remodeling factor PICKLE; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: chromatin remodeling complex subunit 0.0
Internal
uagpf_v2_unigene8920 uagpf v2.0 902
AutoFact: genomes uncoupled 1 protein [Arabidopsis thaliana] sp|Q9SIC9.1|PP178_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g31400, chloroplastic; Flags: Precursor gb|AAD26479.1| unknown protein [Arabidopsis thaliana] gb|AEC08542.1| genomes un 0.0
FL-Next: sp=Pentatricopeptide repeat-containing protein At2g31400, chloroplastic; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: pentatricopeptide repeat-containing protein 0.0
C-terminus
uagpf_v2_unigene8955 uagpf v2.0 449
AutoFact: transcription factor DP1 [Populus tremula x Populus tremuloides] gb|AAP73785.1| DP1 [Populus tremula x Populus tremuloides] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: transcription factor e2 dimerization partner protein 0.0
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain