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Assembly Name: uagpf v2.0

Name: DNA binding

Term: GO:0003677  Help

Source: GO from Blast2go

Ontology: Molecular Function


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
uagpf_v2_unigene3979 uagpf v2.0 932
AutoFact: RecName: Full=DEAD-box ATP-dependent RNA helicase 9 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: dead-box atp-dependent rna helicase 53-like 0.0
N-terminus
uagpf_v2_unigene4004 uagpf v2.0 611
AutoFact: PGAP1 domain containing protein 9.0e-05
FL-Next: tr=Putative uncharacterized protein; Ricinus communis (Castor bean). 0.0
Blast2go: uncharacterized protein loc100247423 0.0
C-terminus
uagpf_v2_unigene4049 uagpf v2.0 1470
AutoFact: EREBP-3 homolog n=2 Tax=Stylosanthes hamata RepID=Q9ZR83_STYHA 2.0e-17
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: ethylene-responsive element binding factor-like protein 7.20587e-20
Putative C-terminus
uagpf_v2_unigene4092 uagpf v2.0 687
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: unknown [Picea sitchensis] 0.0
C-terminus
uagpf_v2_unigene4110 uagpf v2.0 1011
AutoFact: JmjC domain containing protein 3.0e-13
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: transcription factor jumonji domain-containing protein 0.0
Putative C-terminus
uagpf_v2_unigene4157 uagpf v2.0 1611
AutoFact: Putative MYB transcription factor n=1 Tax=Rosa rugosa RepID=F2QKV9_ROSRU 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: myb family transcription factor 0.0
C-terminus
uagpf_v2_unigene4173 uagpf v2.0 670
AutoFact: putative multiple stress-responsive zinc-finger protein [Citrus hybrid cultivar] 2.99878e-43
Blast2go: protein 0.0
unknown
uagpf_v2_unigene4212 uagpf v2.0 1297
AutoFact: Zinc finger, CCCH-type; Sugar transporter superfamily [Medicago truncatula] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: nucleic acid binding 0.0
N-terminus
uagpf_v2_unigene4260 uagpf v2.0 476
AutoFact: BAH-PHD domain-containing protein n=1 Tax=Physcomitrella patens subsp. patens RepID=A9TSM0_PHYPA 0.0
Blast2go: ebs-bah-phd domain-containing protein 0.0
unknown
uagpf_v2_unigene4278 uagpf v2.0 431
AutoFact: Putative MYB transcription factor n=1 Tax=Rosa rugosa RepID=F2QKV9_ROSRU 0.0
Blast2go: myb family transcription factor 0.0
unknown
uagpf_v2_unigene4319 uagpf v2.0 1101
AutoFact: myb family transcription factor [Arabidopsis thaliana] gb|AAD25661.1| hypothetical protein [Arabidopsis thaliana] gb|AEC09803.1| myb family transcription factor [Arabidopsis thaliana] 7.0e-21
FL-Next: sp=Putative Myb family transcription factor At1g14600; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: protein 2.26367e-28
Complete
uagpf_v2_unigene4366 uagpf v2.0 1164
AutoFact: TATA binding protein associated factor n=1 Tax=Solanum tuberosum RepID=Q3LHL0_SOLTU 7.0e-37
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: transcription initiation factor tfiid subunit a 4.14924e-42
C-terminus
uagpf_v2_unigene4438 uagpf v2.0 688
AutoFact: AP2 domain class transcription factor n=1 Tax=Malus x domestica RepID=D5L102_MALDO 2.0e-18
Blast2go: ethylene-responsive element binding factor-like protein 1.14863e-21
unknown
uagpf_v2_unigene4441 uagpf v2.0 676
AutoFact: Transcription factor, putative n=1 Tax=Ricinus communis RepID=B9SRS4_RICCO 2.0e-39
Blast2go: protein 3.53968e-42
unknown
uagpf_v2_unigene4563 uagpf v2.0 682
AutoFact: Putative auxin response factor 10/16/17 (Fragment) n=1 Tax=Cycas rumphii RepID=E1UHY1_CYCRU 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: auxin response factor 18-like 0.0
N-terminus
uagpf_v2_unigene4642 uagpf v2.0 506
AutoFact: Origin recognition complex subunit, putative n=1 Tax=Ricinus communis RepID=B9S8V3_RICCO 0.0
FL-Next: sp=Origin recognition complex subunit 6; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: origin recognition complex subunit 6 0.0
Internal
uagpf_v2_unigene4664 uagpf v2.0 701
AutoFact: Chromatin remodelling complex ATPase chain isw-1, putative n=1 Tax=Ricinus communis RepID=B9S022_RICCO 8.0e-30
Blast2go: chromatin remodelling complex atpase chain isw- 3.6255e-33
unknown
uagpf_v2_unigene4722 uagpf v2.0 446
AutoFact: RecName: Full=FACT complex subunit SSRP1; AltName: Full=Facilitates chromatin transcription complex subunit SSRP1; AltName: Full=Recombination signal sequence recognition protein 1 emb|CAA66480.1| transcription factor [Vicia faba var. minor] 0.0
FL-Next: sp=FACT complex subunit SSRP1-B; Oryza sativa subsp. japonica (Rice). 0.0
Blast2go: fact complex subunit ssrp1 0.0
Internal
uagpf_v2_unigene4798 uagpf v2.0 610
AutoFact: chromatin remodeling factor DDM1a [Oryza sativa Japonica Group] dbj|BAF34944.1| chromatin remodeling factor DDM1a [Oryza sativa Japonica Group] gb|EEE69802.1| hypothetical protein OsJ_29535 [Oryza sativa Japonica Group] 0.0
FL-Next: sp=ATP-dependent DNA helicase DDM1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: chromatin remodeling complex subunit 0.0
Putative N-terminus
uagpf_v2_unigene4891 uagpf v2.0 672
AutoFact: putative RNA helicase [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: activating signal cointegrator 1 complex subunit 0.0
C-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain