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Assembly Name: uagpf v2.0

Name: DNA binding

Term: GO:0003677  Help

Source: GO from Blast2go

Ontology: Molecular Function


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
uagpf_v2_unigene52503 uagpf v2.0 294
AutoFact: DUF1421 multi-domain protein 9.0e-18
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: zinc finger protein 0.0
C-terminus
uagpf_v2_unigene52521 uagpf v2.0 343
AutoFact: NAC domain containing protein 28 [Arabidopsis thaliana] gb|AAF06052.1|AC009513_8 Contains similarity to gb|AF123310 NAC domain protein NAM gene from Arabidopsis thaliana gb|AEE34440.1| NAC domain containing protein 28 [Arabidopsis thaliana] 8.99999e-40
Blast2go: nac domain ipr003441 0.0
unknown
uagpf_v2_unigene52589 uagpf v2.0 355
AutoFact: Arf gtpase-activating protein, putative n=1 Tax=Ricinus communis RepID=B9SNV8_RICCO 0.0
Blast2go: probable adp-ribosylation factor gtpase-activating protein agd8-like 0.0
unknown
uagpf_v2_unigene52924 uagpf v2.0 501
AutoFact: ROOT HAIRLESS 1 [Arabidopsis thaliana] 0.0
FL-Next: sp=DNA-binding protein RHL1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: root hairless 1 0.0
Internal
uagpf_v2_unigene53053 uagpf v2.0 327
AutoFact: Putative methyl-binding domain protein n=1 Tax=Cryptomeria japonica RepID=Q1XG62_CRYJA 9.94922e-44
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: methyl-binding domain protein 0.0
C-terminus
uagpf_v2_unigene53131 uagpf v2.0 390
AutoFact: putative multiple stress-responsive zinc-finger protein [Citrus hybrid cultivar] 2.99878e-43
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
N-terminus
uagpf_v2_unigene53135 uagpf v2.0 430
AutoFact: Similarity to ribonuclease III n=1 Tax=Cryptomeria japonica RepID=Q1XG54_CRYJA 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: ribonuclease iii 0.0
N-terminus
uagpf_v2_unigene53208 uagpf v2.0 542
AutoFact: RecName: Full=ATP-dependent Clp protease ATP-binding subunit clpA homolog CD4B, chloroplastic; Flags: Precursor gb|AAA34161.1| ATP-dependent protease (CD4B) [Solanum lycopersicum] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: chaperone protein chloroplastic-like 0.0
C-terminus
uagpf_v2_unigene53292 uagpf v2.0 356
AutoFact: Ethylene-responsive element binding factor-like protein (Fragment) n=3 Tax=Picea sitchensis RepID=E0ZDA4_PICSI 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: ethylene-responsive element binding factor-like protein 0.0
N-terminus
uagpf_v2_unigene53745 uagpf v2.0 302
AutoFact: DUF3755 domain containing protein 2.0e-13
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
C-terminus
uagpf_v2_unigene53776 uagpf v2.0 448
AutoFact: serine/threonine-protein kinase AtPK1/AtPK6 [Arabidopsis thaliana] sp|P42818.1|KPK1_ARATH RecName: Full=Serine/threonine-protein kinase AtPK1/AtPK6; AltName: Full=Ribosomal-protein S6 kinase homolog 1 gb|AAG51351.1|AC012562_12 putative ribosomal-protein S 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: serine threonine protein kinase 2 0.0
Putative N-terminus
uagpf_v2_unigene54011 uagpf v2.0 466
AutoFact: PHD finger and bromo-adjacent homology domain-containing protein [Arabidopsis thaliana] dbj|BAD95354.1| receptor like protein [Arabidopsis thaliana] gb|AEE84563.1| PHD finger and bromo-adjacent homology domain-containing protein [Arabidopsis thaliana] 0.0
Blast2go: ebs-bah-phd domain-containing protein 0.0
unknown
uagpf_v2_unigene54064 uagpf v2.0 381
AutoFact: DUF296 domain containing protein 1.0e-35
Blast2go: dna-binding protein escarola-like 0.0
Putative coding
uagpf_v2_unigene54164 uagpf v2.0 331
AutoFact: Ethylene-responsive element binding factor-like protein n=5 Tax=Picea sitchensis RepID=E0ZGY9_PICSI 2.0e-16
Blast2go: ethylene-responsive element binding factor-like protein 1.0159e-18
unknown
uagpf_v2_unigene54300 uagpf v2.0 369
AutoFact: transcription factor DcMYB2 [Daucus carota] 0.0
Blast2go: myb transcription factor 0.0
unknown
uagpf_v2_unigene54382 uagpf v2.0 413
AutoFact: pfam02365, NAM, No apical meristem (NAM) protein 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: nac protein 1 0.0
Internal
uagpf_v2_unigene54510 uagpf v2.0 468
AutoFact: putative poly (ADP-ribose) polymerase [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: poly 0.0
C-terminus
uagpf_v2_unigene54602 uagpf v2.0 376
AutoFact: Unassigned protein
Blast2go: unknown [Picea sitchensis] 5.33456e-21
unknown
uagpf_v2_unigene54689 uagpf v2.0 591
AutoFact: AP2 domain containing protein 3.0e-13
Blast2go: dre binding factor 2 2.27499e-33
Coding
uagpf_v2_unigene55231 uagpf v2.0 412
AutoFact: yippee-like protein [Arabidopsis thaliana] gb|AAM62838.1| Yippee-like protein [Arabidopsis thaliana] gb|AAN71946.1| unknown protein [Arabidopsis thaliana] dbj|BAH20057.1| AT2G40110 [Arabidopsis thaliana] gb|AEC09780.1| yippee-like protein [Arabidopsis tha 1.99965e-42
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
Putative Complete

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain