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Assembly Name: uagpf v2.0

Name: DNA binding

Term: GO:0003677  Help

Source: GO from Blast2go

Ontology: Molecular Function

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
uagpf_v2_unigene48774 uagpf v2.0 329
• AutoFact: DOF domain class transcription factor n=1 Tax=Malus x domestica RepID=D9ZIX8_MALDO 9.99995e-41
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: f-box family protein 2.8026e-45
N-terminus
uagpf_v2_unigene48899 uagpf v2.0 354
• AutoFact: zinc finger protein [Aeluropus littoralis] 4.0e-38
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: protein 0.0
N-terminus
uagpf_v2_unigene48987 uagpf v2.0 316
• AutoFact: transcription factor bHLH30 [Arabidopsis thaliana] sp|Q9S7Y1.1|BH030_ARATH RecName: Full=Transcription factor bHLH30; AltName: Full=Basic helix-loop-helix protein 30; Short=AtbHLH30; Short=bHLH 30; AltName: Full=Transcription factor EN 53; AltName: Full=b 5.0e-33
• Blast2go: transcription factor bhlh30 0.0
unknown
uagpf_v2_unigene49679 uagpf v2.0 403
• AutoFact: translation initiation factor 3 subunit B [Arabidopsis thaliana] sp|Q9C5Z1.1|EIF3B_ARATH RecName: Full=Eukaryotic translation initiation factor 3 subunit B; Short=eIF3b; AltName: Full=eIF-3-eta; AltName: Full=eIF3 p110; AltName: Full=p82 gb|AAG53615.1|AF2 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: eukaryotic translation initiation factor 3 subunit b-like 0.0
C-terminus
uagpf_v2_unigene49709 uagpf v2.0 430
• AutoFact: High mobility group family n=1 Tax=Populus trichocarpa RepID=A9PB77_POPTR 2.0e-36
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: high mobility group b protein 7-like 0.0
Putative N-terminus
uagpf_v2_unigene49740 uagpf v2.0 508
• AutoFact: Zinc finger-homeodomain protein 2 n=1 Tax=Saruma henryi RepID=B0LK13_SARHE 0.0
• Blast2go: protein 0.0
unknown
uagpf_v2_unigene49775 uagpf v2.0 468
• AutoFact: histone-lysine N-methyltransferase CLF [Arabidopsis thaliana] sp|P93831.2|CLF_ARATH RecName: Full=Histone-lysine N-methyltransferase CLF; AltName: Full=Polycomb group protein CURLY LEAF; AltName: Full=Protein INCURVATA 1; AltName: Full=Protein SET DOMAIN 0.0
• Blast2go: polycomb protein ez1 0.0
unknown
uagpf_v2_unigene49832 uagpf v2.0 398
• AutoFact: bZIP transcription factor bZIP50 [Glycine max] 0.0
• Blast2go: protein 0.0
unknown
uagpf_v2_unigene50211 uagpf v2.0 226
• AutoFact: [R] COG0613 Predicted metal-dependent phosphoesterases (PHP family) 2.0e-39
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: protein trph-like 0.0
Putative C-terminus
uagpf_v2_unigene50338 uagpf v2.0 404
• AutoFact: GATA transcription factor, putative n=1 Tax=Ricinus communis RepID=B9RQG2_RICCO 0.0
• Blast2go: protein 0.0
unknown
uagpf_v2_unigene50401 uagpf v2.0 302
• AutoFact: Transcription factor, putative n=1 Tax=Ricinus communis RepID=B9SGW9_RICCO 9.80909e-45
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: two-component response regulator ehd1 0.0
Internal
uagpf_v2_unigene50435 uagpf v2.0 332
• AutoFact: ADP-ribosylation factor 3 n=21 Tax=Magnoliophyta RepID=ARF3_ARATH 0.0
• Blast2go: adp-ribosylation factor 3 0.0
unknown
uagpf_v2_unigene50481 uagpf v2.0 308
• AutoFact: high mobility group-box and ARID domain-binding domain-containing protein [Arabidopsis thaliana] sp|Q9MAT6.1|HMG15_ARATH RecName: Full=High mobility group B protein 15; AltName: Full=Nucleosome/chromatin assembly factor group D 15 gb|AAF40449.1|AC004809_7 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: high mobility group family 0.0
Internal
uagpf_v2_unigene50589 uagpf v2.0 370
• AutoFact: DUF3598 domain containing protein 4.0e-08
• FL-Next: tr=Putative uncharacterized protein; Ricinus communis (Castor bean). 0.0
• Blast2go: protein 0.0
C-terminus
uagpf_v2_unigene50599 uagpf v2.0 288
• AutoFact: myb family transcription factor [Brassica oleracea] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: protein 0.0
Internal
uagpf_v2_unigene50610 uagpf v2.0 292
• AutoFact: Poly [ADP-ribose] polymerase 2 [Arabidopsis thaliana] sp|Q11207.1|PARP2_ARATH RecName: Full=Poly [ADP-ribose] polymerase 2; Short=PARP-2; AltName: Full=NAD(+) ADP-ribosyltransferase 2; Short=ADPRT-2; AltName: Full=Poly[ADP-ribose] synthase 2 emb|CAA88288. 0.0
• FL-Next: sp=Poly [ADP-ribose] polymerase 2-A; Oryza sativa subsp. japonica (Rice). 0.0
• Blast2go: poly(adp-ribose) polymerase 0.0
C-terminus
uagpf_v2_unigene50822 uagpf v2.0 349
• AutoFact: pfam00249, Myb_DNA-binding, Myb-like DNA-binding domain 1.0e-05
• Blast2go: telomeric repeat-binding factor 8.75652e-34
Coding
uagpf_v2_unigene50857 uagpf v2.0 258
• AutoFact: Zinc finger protein, putative n=1 Tax=Ricinus communis RepID=B9SC24_RICCO 0.0
• Blast2go: protein 0.0
Coding
uagpf_v2_unigene51087 uagpf v2.0 606
• AutoFact: myb-like HTH transcriptional regulator family protein [Arabidopsis thaliana] ref|NP_974298.1| myb-like HTH transcriptional regulator family protein [Arabidopsis thaliana] gb|AAK92826.1| unknown protein [Arabidopsis thaliana] gb|AAM20308.1| unknown protein 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: two-component response regulator arr 0.0
N-terminus
uagpf_v2_unigene51106 uagpf v2.0 640
• AutoFact: BAH-PHD domain-containing protein n=1 Tax=Physcomitrella patens subsp. patens RepID=A9TRM7_PHYPA 0.0
• Blast2go: bah-phd domain-containing protein 0.0
unknown

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain