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Assembly Name: uagpf v2.0

Name: DNA binding

Term: GO:0003677  Help

Source: GO from Blast2go

Ontology: Molecular Function


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
uagpf_v2_unigene45637 uagpf v2.0 380
AutoFact: Transcription factor, putative n=1 Tax=Ricinus communis RepID=B9SR79_RICCO 1.0e-30
Blast2go: kanadi like transcription factor 6.16344e-36
Coding
uagpf_v2_unigene46040 uagpf v2.0 311
AutoFact: minichromosomal maintenance factor [Triticum aestivum] 0.0
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: minichromosome maintenance protein 2 0.0
Internal
uagpf_v2_unigene46261 uagpf v2.0 364
AutoFact: Whole genome shotgun sequence of line PN40024, scaffold_4.assembly12x (Fragment) n=2 Tax=Vitis vinifera RepID=D7SJG4_VITVI 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: abc transporter family of the mitochondria family 0.0
Internal
uagpf_v2_unigene46371 uagpf v2.0 395
AutoFact: putative CCAAT-binding transcription factor [Oryza sativa Japonica Group] 1.0e-39
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: nuclear transcription factor y subunit a-9-like 0.0
Internal
uagpf_v2_unigene46454 uagpf v2.0 356
AutoFact: DNA repair protein xp-E, putative n=1 Tax=Ricinus communis RepID=B9SKT9_RICCO 0.0
FL-Next: sp=DNA damage-binding protein 1; Solanum lycopersicum (Tomato) (Lycopersicon esculentum). 0.0
Blast2go: dna damage-binding protein 1a 0.0
Internal
uagpf_v2_unigene46528 uagpf v2.0 337
AutoFact: Ethylene-insensitive 3d n=2 Tax=Populus trichocarpa RepID=B9HK87_POPTR 6.0e-38
FL-Next: sp=Protein ETHYLENE INSENSITIVE 3; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: protein ethylene insensitive 3-like 4.2039e-45
Internal
uagpf_v2_unigene46794 uagpf v2.0 360
AutoFact: NAC protein 1 [Elaeis guineensis] gb|ABB72844.1| NAC protein 1 splice variant 2 [Elaeis guineensis] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: nac protein 1 0.0
C-terminus
uagpf_v2_unigene46801 uagpf v2.0 262
AutoFact: DNA binding protein, putative n=1 Tax=Ricinus communis RepID=B9RFB9_RICCO 2.0e-25
Blast2go: ring u-box domain-containing protein 8.79016e-28
Coding
uagpf_v2_unigene46893 uagpf v2.0 428
AutoFact: DNA-directed RNA polymerase (Fragment) n=2 Tax=Vitis vinifera RepID=D7TA90_VITVI 0.0
FL-Next: sp=DNA-directed RNA polymerase 2B, chloroplastic/mitochondrial; Nicotiana tabacum (Common tobacco). 0.0
Blast2go: phage-type rna polymerase 0.0
Internal
uagpf_v2_unigene47454 uagpf v2.0 429
AutoFact: Dimer_Tnp_hAT domain containing protein 7.0e-11
Blast2go: uncharacterized protein loc100255782 0.0
Coding
uagpf_v2_unigene47619 uagpf v2.0 236
AutoFact: pfam00249, Myb_DNA-binding, Myb-like DNA-binding domain 7.0e-05
Blast2go: tsl-kinase interacting protein 1 0.0
unknown
uagpf_v2_unigene47729 uagpf v2.0 402
AutoFact: AP2 domain containing protein 3.0e-13
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: dre binding factor 2 2.27499e-33
N-terminus
uagpf_v2_unigene47903 uagpf v2.0 272
AutoFact: SNF2 family DNA-dependent ATPase (Fragment) n=1 Tax=Physcomitrella patens subsp. patens RepID=A9TTS1_PHYPA 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: chromodomain-helicase-dna-binding protein 2-like 0.0
Internal
uagpf_v2_unigene48019 uagpf v2.0 329
AutoFact: DUF1664 domain containing protein 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
Internal
uagpf_v2_unigene48169 uagpf v2.0 271
AutoFact: DNA polymerase delta catalytic subunit n=6 Tax=Poaceae RepID=DPOD1_ORYSJ 0.0
FL-Next: sp=DNA polymerase delta catalytic subunit; Oryza sativa subsp. japonica (Rice). 0.0
Blast2go: dna polymerase delta subunit 1 0.0
Internal
uagpf_v2_unigene48428 uagpf v2.0 345
AutoFact: Transcription factor, putative n=1 Tax=Ricinus communis RepID=B9RPY7_RICCO 3.0e-29
Blast2go: shattering 4 0.0
unknown
uagpf_v2_unigene48452 uagpf v2.0 329
AutoFact: TATA binding protein associated factor n=1 Tax=Solanum tuberosum RepID=Q3LHL0_SOLTU 7.0e-37
Blast2go: transcription initiation factor tfiid subunit a 4.14924e-42
Coding
uagpf_v2_unigene48475 uagpf v2.0 348
AutoFact: Transcription factor viviparous 1 n=1 Tax=Picea abies RepID=Q9FVK1_PICAB 0.0
FL-Next: tr=VP1/ABI3-like protein; Callitropsis nootkatensis. 0.0
Blast2go: abscisic acid-insensitive protein 3 0.0
Internal
uagpf_v2_unigene48700 uagpf v2.0 355
AutoFact: cohesin complex subunit SA-1/2 [Arabidopsis thaliana] emb|CAB45374.1| stromalin protein [Arabidopsis thaliana] gb|AAL36271.1| putative putative sister-chromatide cohesion protein [Arabidopsis thaliana] gb|AAC63652.2| putative putative sister-chromatide co 0.0
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: sister-chromatide cohesion protein 0.0
Internal
uagpf_v2_unigene48741 uagpf v2.0 323
AutoFact: RecName: Full=B3 domain-containing protein LFL1; AltName: Full=LEC2 and FUSCA3-like protein 1; Short=OsLFL1 gb|ABO64645.1| LFL1 [Oryza sativa Japonica Group] 1.0e-30
Blast2go: b3 domain-containing protein 1.39907e-32
Coding

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain