Sustainpine_db
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Assembly Name: uagpf v2.0

Name: DNA binding

Term: GO:0003677  Help

Source: GO from Blast2go

Ontology: Molecular Function

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
uagpf_v2_unigene40292 uagpf v2.0 322
• AutoFact: MYB transcription factor [Hevea brasiliensis] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: dna binding 0.0
N-terminus
uagpf_v2_unigene40424 uagpf v2.0 370
• AutoFact: DNA-directed RNA polymerase n=1 Tax=Physcomitrella patens subsp. patens RepID=A9RNX6_PHYPA 0.0
• FL-Next: sp=DNA-directed RNA polymerase subunit beta 2; Pinus lambertiana (Sugar pine). Plastid; Chloroplast. 0.0
• Blast2go: dna-directed rna polymerase iii subunit rpc2 0.0
Internal
uagpf_v2_unigene40477 uagpf v2.0 443
• AutoFact: DNA repair and transcription factor XPB1 (ISS) [Ostreococcus tauri] emb|CAL53063.1| DNA repair and transcription factor XPB1 (ISS) [Ostreococcus tauri] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: protein 0.0
Internal
uagpf_v2_unigene40611 uagpf v2.0 497
• AutoFact: Transcription factor, putative n=1 Tax=Ricinus communis RepID=B9RSE9_RICCO 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: uncharacterized protein loc100258626 0.0
Putative Complete
uagpf_v2_unigene40715 uagpf v2.0 445
• AutoFact: Histone H2A n=1 Tax=Picea sitchensis RepID=A9NXR7_PICSI 2.0e-36
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: histone h2a 1.71538e-38
C-terminus
uagpf_v2_unigene40890 uagpf v2.0 294
• AutoFact: replication protein A1 [Oryza sativa Indica Group] gb|EAY89034.1| hypothetical protein OsI_10518 [Oryza sativa Indica Group] 0.0
• FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
• Blast2go: replication protein a 70 kda dna-binding subunit-like 0.0
Internal
uagpf_v2_unigene40923 uagpf v2.0 387
• AutoFact: MYB transcription factor MIXTA-like 2 [Antirrhinum majus] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: myb27 protein 0.0
N-terminus
uagpf_v2_unigene41054 uagpf v2.0 454
• AutoFact: MYB transcription factor [Triticum aestivum] 0.0
• FL-Next: tr=Predicted protein; Physcomitrella patens subsp. patens (Moss). 0.0
• Blast2go: myb transcription factor 0.0
Internal
uagpf_v2_unigene41196 uagpf v2.0 234
• AutoFact: sirtuin 1 [Arabidopsis thaliana] gb|AAG44850.1|AF283757_1 sir2-like protein [Arabidopsis thaliana] dbj|BAB09243.1| transcription regulator Sir2-like protein [Arabidopsis thaliana] gb|AED96677.1| sirtuin 1 [Arabidopsis thaliana] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: sirtuin 1 0.0
Putative N-terminus
uagpf_v2_unigene41208 uagpf v2.0 416
• AutoFact: R2R3-MYB transcription factor MYB11 [Picea glauca] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: protein 0.0
Putative N-terminus
uagpf_v2_unigene41324 uagpf v2.0 378
• AutoFact: Zn finger protein [Nicotiana tabacum] 2.0e-33
• Blast2go: f-box family protein 3.1703e-41
unknown
uagpf_v2_unigene41488 uagpf v2.0 206
• AutoFact: Histone H2B.10 n=5 Tax=Arabidopsis RepID=H2B10_ARATH 9.99967e-42
• Blast2go: histone h2b like protein 0.0
Coding
uagpf_v2_unigene41748 uagpf v2.0 444
• AutoFact: Transcription factor, putative n=1 Tax=Ricinus communis RepID=B9RPY7_RICCO 3.0e-29
• Blast2go: shattering 4 0.0
Putative coding
uagpf_v2_unigene41824 uagpf v2.0 306
• AutoFact: Isoform 2 of Lon protease homolog, mitochondrial n=2 Tax=Oryza sativa RepID=Q69UZ3-2 0.0
• FL-Next: Isoform 2 of Lon protease homolog, mitochondrial OS=Oryza sativa subsp. japonica GN=Os07g0689300 0.0
• Blast2go: lon protease homolog mitochondrial-like 0.0
Internal
uagpf_v2_unigene42073 uagpf v2.0 314
• AutoFact: Isoform 2 of Lon protease homolog, mitochondrial n=2 Tax=Oryza sativa RepID=Q69UZ3-2 0.0
• FL-Next: sp=Lon protease homolog 1, mitochondrial; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Blast2go: lon protease homolog mitochondrial-like 0.0
Internal
uagpf_v2_unigene42123 uagpf v2.0 419
• AutoFact: Ubiquinone biosynthesis protein coq-8, putative n=1 Tax=Ricinus communis RepID=B9RN20_RICCO 7.9874e-44
• FL-Next: tr=Ubiquinone biosynthesis protein coq-8, putative; Ricinus communis (Castor bean). 0.0
• Blast2go: chaperone activity of bc1 complex- mitochondrial-like 0.0
Internal
uagpf_v2_unigene42442 uagpf v2.0 276
• AutoFact: Whole genome shotgun sequence of line PN40024, scaffold_59.assembly12x (Fragment) n=1 Tax=Vitis vinifera RepID=D7TE60_VITVI 0.0
• FL-Next: sp=DNA topoisomerase 1; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Blast2go: dna topoisomerase i 0.0
Internal
uagpf_v2_unigene42569 uagpf v2.0 328
• AutoFact: TBP-associated factor 8 [Arabidopsis thaliana] gb|AAK25888.1|AF360178_1 unknown protein [Arabidopsis thaliana] emb|CAB36711.1| hypothetical protein [Arabidopsis thaliana] emb|CAB80151.1| hypothetical protein [Arabidopsis thaliana] gb|AAK64071.1| unknown p 1.99993e-41
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: protein 0.0
N-terminus
uagpf_v2_unigene42734 uagpf v2.0 286
• AutoFact: DUF3755 domain containing protein 2.0e-13
• Blast2go: protein 0.0
unknown
uagpf_v2_unigene42789 uagpf v2.0 324
• AutoFact: DNA-directed RNA polymerase n=1 Tax=Physcomitrella patens subsp. patens RepID=A9RNX6_PHYPA 0.0
• FL-Next: sp=DNA-directed RNA polymerase II subunit RPB2; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Blast2go: protein 0.0
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain