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Assembly Name: uagpf v2.0

Name: DNA binding

Term: GO:0003677  Help

Source: GO from Blast2go

Ontology: Molecular Function


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
uagpf_v2_unigene38305 uagpf v2.0 487
AutoFact: Lysine-specific histone demethylase, putative n=1 Tax=Ricinus communis RepID=B9R844_RICCO 2.0e-32
Blast2go: lysine-specific histone demethylase-like protein 0.0
unknown
uagpf_v2_unigene38449 uagpf v2.0 455
AutoFact: putative PHD zinc finger protein [Ipomoea trifida] dbj|BAF36299.1| hypothetical protein [Ipomoea trifida] 0.0
FL-Next: tr=PHD finger family protein; Arabidopsis lyrata subsp. lyrata (Lyre-leaved rock-cress). 0.0
Blast2go: dna binding 0.0
Internal
uagpf_v2_unigene38463 uagpf v2.0 437
AutoFact: Zinc finger-homeodomain protein 2 n=1 Tax=Saruma henryi RepID=B0LK13_SARHE 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
N-terminus
uagpf_v2_unigene38598 uagpf v2.0 343
AutoFact: Putative DNA-binding protein n=2 Tax=Arabidopsis thaliana RepID=O81047_ARATH 0.0
Blast2go: dna-binding protein smubp-2-like 0.0
unknown
uagpf_v2_unigene38631 uagpf v2.0 438
AutoFact: Putative auxin response factor 10/16/17 (Fragment) n=1 Tax=Cycas rumphii RepID=E1UHY1_CYCRU 0.0
FL-Next: tr=Putative auxin response factor 3/4; Pinus pinaster (Maritime pine). 0.0
Blast2go: auxin response factor 18-like 0.0
Internal
uagpf_v2_unigene38897 uagpf v2.0 360
AutoFact: AP2 domain class transcription factor n=1 Tax=Malus x domestica RepID=D5L0Z0_MALDO 4.0e-27
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: ap2 erf domain-containing transcription factor 0.0
Putative C-terminus
uagpf_v2_unigene39000 uagpf v2.0 246
AutoFact: phantastica-like MYB protein [Eschscholzia californica subsp. californica] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: asymmetric leaves1 and rough 0.0
Internal
uagpf_v2_unigene39111 uagpf v2.0 230
AutoFact: DNA-directed RNA polymerase n=1 Tax=Physcomitrella patens subsp. patens RepID=A9RNX6_PHYPA 0.0
FL-Next: sp=DNA-directed RNA polymerase II subunit RPB2; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: protein 0.0
Internal
uagpf_v2_unigene39160 uagpf v2.0 299
AutoFact: protein chromatin remodeling 24 [Arabidopsis thaliana] gb|AAL58917.1|AF462829_1 AT5g63950/MBM17_5 [Arabidopsis thaliana] gb|AAM98274.1| At5g63950/MBM17_5 [Arabidopsis thaliana] gb|AED97819.1| protein chromatin remodeling 24 [Arabidopsis thaliana] 0.0
FL-Next: tr=Predicted protein; Hordeum vulgare var. distichum (Two-rowed barley). 0.0
Blast2go: dna excision repair protein ercc-6-like 0.0
Internal
uagpf_v2_unigene39237 uagpf v2.0 490
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: nuclease harbi1-like 0.0
Internal
uagpf_v2_unigene39442 uagpf v2.0 485
AutoFact: pfam00665, rve, Integrase core domain 5.0e-12
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: gag-pol polyprotein 0.0
Internal
uagpf_v2_unigene39488 uagpf v2.0 248
AutoFact: protein ULTRAPETALA 1 [Arabidopsis thaliana] sp|Q8GZA8.1|ULT1_ARATH RecName: Full=Protein ULTRAPETALA 1 dbj|BAC41785.1| unknown protein [Arabidopsis thaliana] gb|ABH04520.1| At4g28190 [Arabidopsis thaliana] gb|AEE85451.1| protein ULTRAPETALA 1 [Arabidopsi 0.0
Blast2go: protein ultrapetala 1 0.0
unknown
uagpf_v2_unigene39624 uagpf v2.0 450
AutoFact: Myc2 bHLH protein n=2 Tax=Vitis vinifera RepID=A6NAB4_VITVI 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: transcription factor bhlh13 0.0
Internal
uagpf_v2_unigene39974 uagpf v2.0 255
AutoFact: SET domain protein SDG111 [Zea mays] gb|AAO32934.2| SET domain protein SDG111 [Zea mays] 0.0
FL-Next: sp=Histone-lysine N-methyltransferase, H3 lysine-9 specific SUVH1; Nicotiana tabacum (Common tobacco). 0.0
Blast2go: histone-lysine n- h3 lysine-9 specific suvh1 0.0
Internal
uagpf_v2_unigene40042 uagpf v2.0 542
AutoFact: Chromatin remodeling complex subunit (Fragment) n=1 Tax=Populus trichocarpa RepID=B9MYK9_POPTR 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: swi snf-related matrix-associated actin-dependent regulator of chromatin subfamily a member 3-like 2-like 0.0
Internal
uagpf_v2_unigene40171 uagpf v2.0 413
AutoFact: RecName: Full=MAR-binding filament-like protein 1-1 gb|AAF36519.1|AF131231_1 MAR-binding protein MFP1 homolog [Nicotiana tabacum] 2.0e-27
FL-Next: tr=Os05g0180400 protein; Oryza sativa subsp. japonica (Rice). 0.0
Blast2go: mar-binding filament-like protein 1-1-like 7.17052e-34
Internal
uagpf_v2_unigene40188 uagpf v2.0 471
AutoFact: ARID/BRIGHT DNA-binding domain-containing protein (Fragment) n=1 Tax=Physcomitrella patens subsp. patens RepID=A9S710_PHYPA 0.0
FL-Next: tr=Putative uncharacterized protein; Selaginella moellendorffii (Spikemoss). 0.0
Blast2go: arid bright dna-binding domain-containing protein 0.0
Internal
uagpf_v2_unigene40197 uagpf v2.0 274
AutoFact: MYB transcription factor [Triticum aestivum] 0.0
Blast2go: myb transcription factor 0.0
Putative coding
uagpf_v2_unigene40210 uagpf v2.0 390
AutoFact: SEUSS transcriptional co-regulator [Arabidopsis thaliana] ref|NP_001117434.1| SEUSS transcriptional co-regulator [Arabidopsis thaliana] sp|Q8W234.1|SEUSS_ARATH RecName: Full=Transcriptional corepressor SEUSS gb|AAL57277.1| SEUSS transcriptional co-regulat 0.0
FL-Next: sp=Transcriptional corepressor SEUSS; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: seuss transcriptional co-regulator 0.0
Internal
uagpf_v2_unigene40249 uagpf v2.0 398
AutoFact: Zinc finger A20 and AN1 domain-containing stress-associated protein 8 n=3 Tax=Oryza sativa RepID=SAP8_ORYSJ 4.00001e-41
Blast2go: multiple stress-responsive zinc-finger protein 0.0
unknown

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain