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Assembly Name: uagpf v2.0

Name: DNA binding

Term: GO:0003677  Help

Source: GO from Blast2go

Ontology: Molecular Function

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
uagpf_v2_unigene37297 uagpf v2.0 437
• AutoFact: Predicted protein (Fragment) n=2 Tax=Physcomitrella patens RepID=A9RYR4_PHYPA 0.0
• Blast2go: myb-related protein 3r-1-like 0.0
unknown
uagpf_v2_unigene37514 uagpf v2.0 588
• AutoFact: MYB transcription factor MYB93 n=2 Tax=Glycine max RepID=Q0PJJ8_SOYBN 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: myb family transcription factor 0.0
Internal
uagpf_v2_unigene37518 uagpf v2.0 437
• AutoFact: DNA damage-binding protein 2 [Arabidopsis thaliana] sp|Q6NQ88.1|DDB2_ARATH RecName: Full=Protein DAMAGED DNA-BINDING 2; AltName: Full=UV-damaged DNA-binding protein 2 gb|AAQ65193.1| At5g58760 [Arabidopsis thaliana] dbj|BAD42887.1| putative protein [Arabid 0.0
• FL-Next: sp=Protein DAMAGED DNA-BINDING 2; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Blast2go: protein damaged dna-binding 2 0.0
N-terminus
uagpf_v2_unigene37561 uagpf v2.0 462
• AutoFact: transcription factor, putative 5.0e-39
• Blast2go: protein 0.0
unknown
uagpf_v2_unigene37658 uagpf v2.0 486
• AutoFact: pentatricopeptide repeat-containing protein [Arabidopsis thaliana] gb|AAF79432.1|AC025808_14 F18O14.27 [Arabidopsis thaliana] gb|AEE29863.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana] 0.0
• FL-Next: sp=Protein NUCLEAR FUSION DEFECTIVE 5, mitochondrial; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Blast2go: pentatricopeptide repeat-containing protein 0.0
Putative C-terminus
uagpf_v2_unigene37660 uagpf v2.0 404
• AutoFact: Unassigned protein
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: protein 0.0
Internal
uagpf_v2_unigene37688 uagpf v2.0 536
• AutoFact: DNA repair and transcription factor XPB1 (ISS) [Ostreococcus tauri] emb|CAL53063.1| DNA repair and transcription factor XPB1 (ISS) [Ostreococcus tauri] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: protein 0.0
Internal
uagpf_v2_unigene37863 uagpf v2.0 437
• AutoFact: putative CCAAT-binding transcription factor [Oryza sativa Japonica Group] 1.0e-39
• Blast2go: nuclear transcription factor y subunit a-9-like 0.0
unknown
uagpf_v2_unigene37868 uagpf v2.0 576
• AutoFact: Histone acetyltransferase gcn5, putative n=1 Tax=Ricinus communis RepID=B9S4R6_RICCO 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: histone acetyltransferase 0.0
Internal
uagpf_v2_unigene37906 uagpf v2.0 382
• AutoFact: high mobility group-box and ARID domain-binding domain-containing protein [Arabidopsis thaliana] sp|Q9MAT6.1|HMG15_ARATH RecName: Full=High mobility group B protein 15; AltName: Full=Nucleosome/chromatin assembly factor group D 15 gb|AAF40449.1|AC004809_7 0.0
• Blast2go: high mobility group family 0.0
Coding
uagpf_v2_unigene37993 uagpf v2.0 319
• AutoFact: NO APICAL MERISTEM2 n=2 Tax=Pisum sativum RepID=B8XS03_PEA 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: no apical meristem 0.0
N-terminus
uagpf_v2_unigene38037 uagpf v2.0 432
• AutoFact: transcription factor, putative 0.0
• Blast2go: two-component response regulator arr 0.0
unknown
uagpf_v2_unigene38052 uagpf v2.0 358
• AutoFact: Putative MYB transcription factor n=1 Tax=Rosa rugosa RepID=F2QKV9_ROSRU 0.0
• Blast2go: myb family transcription factor 0.0
unknown
uagpf_v2_unigene38068 uagpf v2.0 511
• AutoFact: protein DP-E2F-like 1 [Arabidopsis thaliana] emb|CAD10633.1| transcription factor E2Fe [Arabidopsis thaliana] gb|AEE78374.1| protein DP-E2F-like 1 [Arabidopsis thaliana] 2.0e-34
• FL-Next: Isoform 2 of E2F transcription factor-like E2FE OS=Arabidopsis thaliana GN=E2FE 0.0
• Blast2go: antagonist of e2f-dp complex 0.0
Internal
uagpf_v2_unigene38092 uagpf v2.0 472
• AutoFact: DUF260 multi-domain protein 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: lob domain-containing protein 12-like 0.0
Putative N-terminus
uagpf_v2_unigene38113 uagpf v2.0 524
• AutoFact: SEUSS transcriptional co-regulator [Arabidopsis thaliana] ref|NP_001117434.1| SEUSS transcriptional co-regulator [Arabidopsis thaliana] sp|Q8W234.1|SEUSS_ARATH RecName: Full=Transcriptional corepressor SEUSS gb|AAL57277.1| SEUSS transcriptional co-regulat 0.0
• FL-Next: sp=Transcriptional corepressor SEUSS; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Blast2go: transcriptional corepressor seuss-like 0.0
Internal
uagpf_v2_unigene38141 uagpf v2.0 266
• AutoFact: sequence-specific DNA binding transcription factor [Arabidopsis thaliana] gb|AAM13041.1| unknown protein [Arabidopsis thaliana] gb|AAO30091.1| unknown protein [Arabidopsis thaliana] gb|AEE76088.1| sequence-specific DNA binding transcription factor [Arabid 0.0
• Blast2go: dna binding 0.0
unknown
uagpf_v2_unigene38154 uagpf v2.0 396
• AutoFact: DNA polymerase I n=3 Tax=Andropogoneae RepID=B4FJZ1_MAIZE 0.0
• Blast2go: 5 -3 exonuclease-like protein 0.0
unknown
uagpf_v2_unigene38201 uagpf v2.0 327
• AutoFact: DNA polymerase I n=3 Tax=Andropogoneae RepID=B4FJZ1_MAIZE 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: 5 -3 exonuclease-like protein 0.0
Putative C-terminus
uagpf_v2_unigene38247 uagpf v2.0 264
• AutoFact: TPA_inf: class IV HD-Zip protein HDZ41 [Physcomitrella patens] 0.0
• FL-Next: tr=Homeodomain protein HB2; Picea abies (Norway spruce) (Picea excelsa). 0.0
• Blast2go: homeodomain protein 0.0
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain