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Assembly Name: uagpf v2.0

Name: DNA binding

Term: GO:0003677  Help

Source: GO from Blast2go

Ontology: Molecular Function


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
uagpf_v2_unigene1491 uagpf v2.0 1114
AutoFact: BAH-PHD domain-containing protein n=1 Tax=Physcomitrella patens subsp. patens RepID=A9TRM7_PHYPA 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: bah-phd domain-containing protein 0.0
N-terminus
uagpf_v2_unigene1519 uagpf v2.0 650
AutoFact: Retrotransposon protein, putative, Ty1-copia subclass n=9 Tax=Oryza sativa RepID=Q109L4_ORYSJ 5.0e-15
FL-Next: sp=Retrovirus-related Pol polyprotein from transposon TNT 1-94; Nicotiana tabacum (Common tobacco). 0.0
Blast2go: copia partial 1.08822e-18
C-terminus
uagpf_v2_unigene1537 uagpf v2.0 440
AutoFact: sequence-specific DNA binding transcription factor [Arabidopsis thaliana] gb|AAM13041.1| unknown protein [Arabidopsis thaliana] gb|AAO30091.1| unknown protein [Arabidopsis thaliana] gb|AEE76088.1| sequence-specific DNA binding transcription factor [Arabid 0.0
Blast2go: dna binding 0.0
unknown
uagpf_v2_unigene1560 uagpf v2.0 697
AutoFact: Squamosa promoter-binding protein, putative n=1 Tax=Ricinus communis RepID=B9R8V3_RICCO 0.0
Blast2go: squamosa promoter-binding-like protein 14-like 0.0
unknown
uagpf_v2_unigene1566 uagpf v2.0 963
AutoFact: PTEN_C2 multi-domain protein 6.0e-37
FL-Next: sp=Formin-like protein 3; Oryza sativa subsp. japonica (Rice). 0.0
Blast2go: dna binding 0.0
Internal
uagpf_v2_unigene1575 uagpf v2.0 497
AutoFact: minichromosomal maintenance factor [Triticum aestivum] 0.0
Blast2go: minichromosome maintenance protein 2 0.0
Coding
uagpf_v2_unigene1609 uagpf v2.0 593
AutoFact: MYB transcription factor MYB93 n=2 Tax=Glycine max RepID=Q0PJJ8_SOYBN 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: myb family transcription factor 0.0
Internal
uagpf_v2_unigene1612 uagpf v2.0 1475
AutoFact: Proliferating cell nuclear antigen n=16 Tax=Spermatophyta RepID=PCNA_CATRO 0.0
FL-Next: sp=Proliferating cell nuclear antigen; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: proliferating cell nuclear antigen 0.0
Complete
uagpf_v2_unigene1638 uagpf v2.0 713
AutoFact: transcription factor bHLH30 [Arabidopsis thaliana] sp|Q9S7Y1.1|BH030_ARATH RecName: Full=Transcription factor bHLH30; AltName: Full=Basic helix-loop-helix protein 30; Short=AtbHLH30; Short=bHLH 30; AltName: Full=Transcription factor EN 53; AltName: Full=b 3.99931e-42
FL-Next: sp=Transcription factor bHLH30; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: transcription factor bhlh30 0.0
C-terminus
uagpf_v2_unigene1663 uagpf v2.0 262
AutoFact: DUF296 domain containing protein 3.0e-25
Blast2go: dna-binding protein escarola-like 7.31837e-29
unknown
uagpf_v2_unigene1670 uagpf v2.0 840
AutoFact: DNA polymerase epsilon subunit B -like protein [Arabidopsis thaliana] 0.0
FL-Next: tr=Os05g0160800 protein; Oryza sativa subsp. japonica (Rice). 0.0
Blast2go: dna polymerase epsilon subunit 2-like 0.0
C-terminus
uagpf_v2_unigene1722 uagpf v2.0 495
AutoFact: MYB transcription factor MYB93 n=2 Tax=Glycine max RepID=Q0PJJ8_SOYBN 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: myb family transcription factor 0.0
N-terminus
uagpf_v2_unigene1765 uagpf v2.0 335
AutoFact: Transcriptional adapter ADA2 n=9 Tax=Poaceae RepID=TADA2_ORYSJ 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: transcriptional adapter ada2-like 0.0
Internal
uagpf_v2_unigene1768 uagpf v2.0 387
AutoFact: Inducer of CBF expression 1 (Fragment) n=1 Tax=Picea abies RepID=B2KZF3_PICAB 0.0
Blast2go: transcription factor ice1 0.0
unknown
uagpf_v2_unigene1770 uagpf v2.0 498
AutoFact: Transcription factor viviparous 1 n=1 Tax=Picea abies RepID=Q9FVK1_PICAB 0.0
FL-Next: tr=Transcription factor viviparous 1; Picea abies (Norway spruce) (Picea excelsa). 0.0
Blast2go: vp1 abi3-like protein 0.0
Internal
uagpf_v2_unigene1774 uagpf v2.0 330
AutoFact: putative DNA-binding protein [Arabidopsis thaliana] gb|AED94034.1| putative DNA-binding protein [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: dna-binding protein smubp-2-like 0.0
C-terminus
uagpf_v2_unigene1777 uagpf v2.0 1023
AutoFact: BAH and TFIIS domain-containing protein [Arabidopsis thaliana] emb|CAB41133.1| putative protein [Arabidopsis thaliana] gb|AEE78362.1| BAH and TFIIS domain-containing protein [Arabidopsis thaliana] 3.00018e-42
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: dna binding 0.0
Complete
uagpf_v2_unigene1805 uagpf v2.0 291
AutoFact: AP2 domain class transcription factor n=1 Tax=Malus x domestica RepID=D5L102_MALDO 2.0e-18
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: ethylene-responsive element binding factor-like protein 1.14863e-21
N-terminus
uagpf_v2_unigene1886 uagpf v2.0 733
AutoFact: DNA photolyase, putative n=1 Tax=Ricinus communis RepID=B9SPQ6_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: cryptochrome dash 0.0
Internal
uagpf_v2_unigene1906 uagpf v2.0 388
AutoFact: DNA-directed RNA polymerase n=1 Tax=Physcomitrella patens subsp. patens RepID=A9RNX6_PHYPA 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: dna-directed rna polymerase iii subunit rpc2 0.0
N-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain