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Assembly Name: uagpf v2.0

Name: DNA binding

Term: GO:0003677  Help

Source: GO from Blast2go

Ontology: Molecular Function


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
uagpf_v2_unigene10402 uagpf v2.0 417
AutoFact: pfam02365, NAM, No apical meristem (NAM) protein 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: nac protein 1 0.0
Putative N-terminus
uagpf_v2_unigene10405 uagpf v2.0 309
AutoFact: DNA-directed RNA polymerase subunit n=1 Tax=Picea sitchensis RepID=D5AAK0_PICSI 0.0
Blast2go: dna-directed rna polymerases iii kda 0.0
unknown
uagpf_v2_unigene10511 uagpf v2.0 260
AutoFact: DUF3535 domain containing protein 0.0001
FL-Next: tr=Putative SNF2 domain-containing protein; Oryza sativa subsp. japonica (Rice). 0.0
Blast2go: tata box binding protein associated factor-like protein 0.0
Internal
uagpf_v2_unigene10512 uagpf v2.0 473
AutoFact: pfam00271, Helicase_C, Helicase conserved C-terminal domain 6.0e-16
FL-Next: sp=Putative SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 3-like 2; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: helicase and zinc finger domain-containing protein 0.0
Internal
uagpf_v2_unigene10570 uagpf v2.0 824
AutoFact: AP2 domain-containing transcription factor 7 n=1 Tax=Glycine max RepID=C9WA65_SOYBN 2.0e-31
Blast2go: dehydration responsive element binding protein 7.17662e-34
unknown
uagpf_v2_unigene10689 uagpf v2.0 356
AutoFact: Transcription factor, putative n=1 Tax=Ricinus communis RepID=B9RCQ0_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: high mobility group family 0.0
Internal
uagpf_v2_unigene10692 uagpf v2.0 708
AutoFact: Homeodomain-like; Uridylate kinase [Medicago truncatula] 6.0e-28
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: uridylate kinase 7.33348e-30
C-terminus
uagpf_v2_unigene10695 uagpf v2.0 1077
AutoFact: Transcription factor, putative n=1 Tax=Ricinus communis RepID=B9SGW9_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: myb-cc type transfactor 0.0
C-terminus
uagpf_v2_unigene10849 uagpf v2.0 1211
AutoFact: heat shock factor protein hsf8-related [Glycine max] 0.0
Blast2go: heat shock transcription factor 1 0.0
unknown
uagpf_v2_unigene10893 uagpf v2.0 1610
AutoFact: putative replication licensing factor MCM4 [Oryza sativa Japonica Group] 0.0
FL-Next: sp=Protein PROLIFERA; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: dna replication licensing factor mcm4 0.0
C-terminus
uagpf_v2_unigene10914 uagpf v2.0 575
AutoFact: DNA polymerase n=1 Tax=Physcomitrella patens subsp. patens RepID=A9SXI7_PHYPA 0.0
FL-Next: sp=DNA polymerase; Sorghum bicolor (Sorghum) (Sorghum vulgare). 0.0
Blast2go: dna polymerase epsilon catalytic subunit a 0.0
C-terminus
uagpf_v2_unigene10945 uagpf v2.0 565
AutoFact: flap endonuclease-1 [Arabidopsis thaliana] gb|AED93576.1| flap endonuclease-1 [Arabidopsis thaliana] 0.0
Blast2go: flap endonuclease 1a 0.0
unknown
uagpf_v2_unigene10947 uagpf v2.0 361
AutoFact: Cytosine-specific methyltransferase n=2 Tax=Hieracium RepID=D0V1M9_HIEPL 0.0
FL-Next: sp=DNA (cytosine-5)-methyltransferase 1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: cytosine-5 dna methyltransferase 0.0
Internal
uagpf_v2_unigene11093 uagpf v2.0 252
AutoFact: NAM [Petunia x hybrida] emb|CAA63102.2| NAM [Petunia x hybrida] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: nac domain ipr003441 0.0
N-terminus
uagpf_v2_unigene11100 uagpf v2.0 398
AutoFact: Protein phosphatase 2a, regulatory subunit, putative n=1 Tax=Ricinus communis RepID=B9SH46_RICCO 0.0
FL-Next: sp=Serine/threonine protein phosphatase 2A 59 kDa regulatory subunit B' gamma isoform; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: protein 0.0
Internal
uagpf_v2_unigene11107 uagpf v2.0 790
AutoFact: response regulator 8 [Zea mays] dbj|BAB41137.1| response regulator 8 [Zea mays] gb|ACG47663.1| two-component response regulator ARR1 [Zea mays] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: type-b response regulator 0.0
N-terminus
uagpf_v2_unigene11153 uagpf v2.0 394
AutoFact: DNA damage-binding protein 2 [Arabidopsis thaliana] sp|Q6NQ88.1|DDB2_ARATH RecName: Full=Protein DAMAGED DNA-BINDING 2; AltName: Full=UV-damaged DNA-binding protein 2 gb|AAQ65193.1| At5g58760 [Arabidopsis thaliana] dbj|BAD42887.1| putative protein [Arabid 0.0
FL-Next: sp=Protein DAMAGED DNA-BINDING 2; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: protein damaged dna-binding 2 0.0
Internal
uagpf_v2_unigene11239 uagpf v2.0 597
AutoFact: Zn finger protein [Nicotiana tabacum] 2.0e-33
Blast2go: f-box family protein 3.1703e-41
unknown
uagpf_v2_unigene11268 uagpf v2.0 431
AutoFact: transcription factor DcMYB2 [Daucus carota] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: myb transcription factor 0.0
N-terminus
uagpf_v2_unigene11379 uagpf v2.0 464
AutoFact: MYB transcription factor MYB93 [Glycine max] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
Putative Complete

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain