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Assembly Name: uagpf v2.0

Name: ubiquitin-protein ligase activity

Term: GO:0004842  Help

Source: GO from Blast2go

Ontology: Molecular Function

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
uagpf_v2_unigene27322 uagpf v2.0 553
• AutoFact: KAP multi-domain protein 6.0e-08
• Blast2go: u-box domain-containing protein 4-like 0.0
unknown
uagpf_v2_unigene27632 uagpf v2.0 560
• AutoFact: F-box/LRR-repeat protein 4 [Arabidopsis thaliana] sp|Q9C5D2.1|FBL4_ARATH RecName: Full=F-box/LRR-repeat protein 4; Short=AtFBL4 gb|AAK26038.1|AF360328_1 putative F-box protein family, AtFBL4 [Arabidopsis thaliana] gb|AAK32821.1|AF361808_1 AT4g15470/dl3775 0.0
• FL-Next: sp=F-box/LRR-repeat protein 4; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Blast2go: f-box lrr-repeat protein 4-like 0.0
C-terminus
uagpf_v2_unigene27791 uagpf v2.0 511
• AutoFact: putative ubiquitin conjugation factor E4 [Arabidopsis thaliana] sp|Q9LF41.1|UBE4_ARATH RecName: Full=Probable ubiquitin conjugation factor E4; AltName: Full=Plant U-box protein 1; AltName: Full=U-box domain-containing protein 1; AltName: Full=Ubiquitin-fu 0.0
• FL-Next: sp=Probable ubiquitin conjugation factor E4; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Blast2go: probable ubiquitin conjugation factor e4-like 0.0
Internal
uagpf_v2_unigene28056 uagpf v2.0 342
• AutoFact: U-box multi-domain protein 3.0e-20
• Blast2go: protein 0.0
Coding
uagpf_v2_unigene28166 uagpf v2.0 563
• AutoFact: F-box protein FBW2 [Arabidopsis thaliana] ref|NP_849346.1| F-box protein FBW2 [Arabidopsis thaliana] ref|NP_974523.1| F-box protein FBW2 [Arabidopsis thaliana] ref|NP_001078359.1| F-box protein FBW2 [Arabidopsis thaliana] ref|NP_001154215.1| F-box protein 0.0
• FL-Next: sp=F-box protein FBW2; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Blast2go: f-box protein fbw2 0.0
N-terminus
uagpf_v2_unigene28511 uagpf v2.0 459
• AutoFact: KAP multi-domain protein 6.0e-08
• Blast2go: u-box domain-containing protein 4-like 0.0
unknown
uagpf_v2_unigene28676 uagpf v2.0 432
• AutoFact: Unassigned protein
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: f-box lrr-repeat protein 14 0.0
Internal
uagpf_v2_unigene28992 uagpf v2.0 157
• AutoFact: putative ubiquitin conjugation factor E4 [Arabidopsis thaliana] sp|Q9LF41.1|UBE4_ARATH RecName: Full=Probable ubiquitin conjugation factor E4; AltName: Full=Plant U-box protein 1; AltName: Full=U-box domain-containing protein 1; AltName: Full=Ubiquitin-fu 0.0
• FL-Next: sp=Probable ubiquitin conjugation factor E4; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Blast2go: probable ubiquitin conjugation factor e4-like 0.0
Internal
uagpf_v2_unigene29015 uagpf v2.0 327
• AutoFact: E3 ubiquitin-protein ligase PUB22 [Arabidopsis thaliana] sp|Q9SVC6.1|PUB22_ARATH RecName: Full=E3 ubiquitin-protein ligase PUB22; AltName: Full=Plant U-box protein 22; AltName: Full=U-box domain-containing protein 22 emb|CAB43434.1| putative protein [Arab 9.0e-13
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: e3 ubiquitin-protein ligase pub23-like 5.8674e-28
C-terminus
uagpf_v2_unigene29187 uagpf v2.0 390
• AutoFact: Ubiquitin-protein ligase, PUB13 n=2 Tax=Selaginella moellendorffii RepID=D8SNN8_SELML 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: ubiquitin-protein pub13 0.0
Putative C-terminus
uagpf_v2_unigene29229 uagpf v2.0 340
• AutoFact: Ubiquitin; TRAF-like [Medicago truncatula] 4.0e-38
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: ubiquitin 0.0
Putative N-terminus
uagpf_v2_unigene29352 uagpf v2.0 384
• AutoFact: Protein UNUSUAL FLORAL ORGANS, putative n=1 Tax=Ricinus communis RepID=B9RE08_RICCO 0.0
• Blast2go: f-box kelch-repeat protein 0.0
unknown
uagpf_v2_unigene29485 uagpf v2.0 364
• AutoFact: Ubiquitin-protein ligase, putative n=1 Tax=Ricinus communis RepID=B9R8Q6_RICCO 0.0
• FL-Next: sp=U-box domain-containing protein 43; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Blast2go: protein 0.0
Internal
uagpf_v2_unigene29648 uagpf v2.0 467
• AutoFact: Cyclin-like F-box [Medicago truncatula] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: f-box family protein 0.0
Internal
uagpf_v2_unigene30070 uagpf v2.0 320
• AutoFact: DNA binding protein, putative n=1 Tax=Ricinus communis RepID=B9RFB9_RICCO 2.0e-25
• Blast2go: ring u-box domain-containing protein 8.79016e-28
unknown
uagpf_v2_unigene30189 uagpf v2.0 529
• AutoFact: DNA binding protein, putative n=1 Tax=Ricinus communis RepID=B9RFB9_RICCO 2.0e-25
• FL-Next: tr=Predicted protein; subsp. trichocarpa). 0.0
• Blast2go: ring u-box domain-containing protein 8.79016e-28
Putative N-terminus
uagpf_v2_unigene30456 uagpf v2.0 688
• AutoFact: Protein binding protein, putative n=1 Tax=Ricinus communis RepID=B9T7C4_RICCO 1.0e-37
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: protein binding 0.0
N-terminus
uagpf_v2_unigene30490 uagpf v2.0 416
• AutoFact: ZEITLUPE n=1 Tax=Mesembryanthemum crystallinum RepID=Q6UEI5_MESCR 0.0
• FL-Next: sp=Adagio-like protein 1; Oryza sativa subsp. japonica (Rice). 0.0
• Blast2go: adagio protein 1 0.0
Internal
uagpf_v2_unigene30781 uagpf v2.0 300
• AutoFact: U-box domain-containing protein 9 [Arabidopsis thaliana] sp|Q9SRT0.1|PUB9_ARATH RecName: Full=U-box domain-containing protein 9; AltName: Full=Plant U-box protein 9 gb|AAF02146.1|AC009853_6 hypothetical protein [Arabidopsis thaliana] gb|AAL91644.1| AT3g07 5.0e-30
• Blast2go: protein 8.23859e-36
Coding
uagpf_v2_unigene31351 uagpf v2.0 339
• AutoFact: KAP multi-domain protein 6.0e-08
• Blast2go: u-box domain-containing protein 4-like 0.0
Putative coding

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain