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Assembly Name: uagpf v2.0

Name: embryo development ending in seed dormancy

Term: GO:0009793  Help

Source: GO from Blast2go

Ontology: Biological Process


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
uagpf_v2_unigene11321 uagpf v2.0 455
AutoFact: uncharacterized protein [Arabidopsis thaliana] emb|CAB78086.1| putative protein [Arabidopsis thaliana] emb|CAB82130.1| putative protein [Arabidopsis thaliana] dbj|BAF01038.1| hypothetical protein [Arabidopsis thaliana] gb|AEE82773.1| uncharacterized prote 0.0
Blast2go: protein 0.0
unknown
uagpf_v2_unigene11351 uagpf v2.0 382
AutoFact: SufE-like protein [Arabidopsis thaliana] sp|Q84W65.2|SUFE_ARATH RecName: Full=SufE-like protein, chloroplastic; AltName: Full=Protein EMBRYO DEFECTIVE 1374; Flags: Precursor emb|CAA18220.1| putative protein [Arabidopsis thaliana] emb|CAB79505.1| putative 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
N-terminus
uagpf_v2_unigene11352 uagpf v2.0 723
AutoFact: Whole genome shotgun sequence of line PN40024, scaffold_46.assembly12x (Fragment) n=2 Tax=Vitis vinifera RepID=D7UCP6_VITVI 0.0
FL-Next: sp=Beclin-1-like protein; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: beclin 1 protein 0.0
N-terminus
uagpf_v2_unigene11425 uagpf v2.0 480
AutoFact: pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16 [Arabidopsis thaliana] gb|AAL67014.1| putative RNA helicase [Arabidopsis thaliana] gb|AAM91806.1| putative RNA helicase [Arabidopsis thaliana] gb|AEE31492.1| pre-mRNA-splicing factor ATP-dependent 3.0e-40
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: pre-mrna-splicing factor atp-dependent rna helicase dhx16 0.0
Putative C-terminus
uagpf_v2_unigene11458 uagpf v2.0 1166
AutoFact: NADH-ubiquinone oxidoreductase 75 kDa subunit n=1 Tax=Picea sitchensis RepID=B8LMM8_PICSI 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: nadh-ubiquinone oxidoreductase subunit 0.0
N-terminus
uagpf_v2_unigene11584 uagpf v2.0 778
AutoFact: 4-amino-4-deoxychorismate synthase n=2 Tax=Triticeae RepID=A4UIY9_WHEAT 0.0
FL-Next: sp=Anthranilate synthase component I-2, chloroplastic; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: para-aminobenzoate synthase-like 0.0
Putative C-terminus
uagpf_v2_unigene11642 uagpf v2.0 431
AutoFact: GTP-binding protein engB, putative n=1 Tax=Ricinus communis RepID=B9SH28_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: gtp-binding protein 0.0
C-terminus
uagpf_v2_unigene11657 uagpf v2.0 375
AutoFact: Beta-tubulin cofactor d, putative n=1 Tax=Ricinus communis RepID=B9RD93_RICCO 2.0e-32
FL-Next: tr=Beta-tubulin cofactor d, putative; Ricinus communis (Castor bean). 0.0
Blast2go: protein 8.14546e-37
Internal
uagpf_v2_unigene11717 uagpf v2.0 377
AutoFact: Vacuolar sorting protein 39 [Arabidopsis thaliana] gb|AAM20730.1| unknown protein [Arabidopsis thaliana] gb|AEE86679.1| Vacuolar sorting protein 39 [Arabidopsis thaliana] 0.0
FL-Next: tr=Predicted protein; subsp. trichocarpa). 0.0
Blast2go: vam6 vps39-like 0.0
C-terminus
uagpf_v2_unigene11991 uagpf v2.0 614
AutoFact: Histone deacetylase (Fragment) n=2 Tax=Malpighiales RepID=B9IEX4_POPTR 0.0
Blast2go: histone deacetylase 0.0
unknown
uagpf_v2_unigene12408 uagpf v2.0 534
AutoFact: protein embryo defective 2737 [Arabidopsis thaliana] gb|AAK91445.1| AT5g53860/K19P17_2 [Arabidopsis thaliana] gb|AAL06827.1| AT5g53860/K19P17_2 [Arabidopsis thaliana] gb|AAM16255.1| AT5g53860/K19P17_2 [Arabidopsis thaliana] gb|AED96417.1| protein embryo d 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein embryo defective 2737 0.0
Putative Complete
uagpf_v2_unigene12481 uagpf v2.0 555
AutoFact: myosin heavy chain-related protein [Arabidopsis thaliana] ref|NP_001189526.1| myosin heavy chain-related protein [Arabidopsis thaliana] gb|AAC69374.1| unknown protein [Arabidopsis thaliana] gb|AEC06319.1| myosin heavy chain-related protein [Arabidopsis th 0.0
Blast2go: myosin heavy chain-related protein 0.0
unknown
uagpf_v2_unigene12828 uagpf v2.0 584
AutoFact: Chain A, Short Chain Specific Acyl-Coa Oxidase From Arabidopsis Thaliana, Acx4 pdb|2IX6|B Chain B, Short Chain Specific Acyl-Coa Oxidase From Arabidopsis Thaliana, Acx4 pdb|2IX6|C Chain C, Short Chain Specific Acyl-Coa Oxidase From Arabidopsis Thaliana, A 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: acyl-coenzyme a oxidase peroxisomal-like 0.0
N-terminus
uagpf_v2_unigene12865 uagpf v2.0 285
AutoFact: protoporphyrinogen IX oxidase [Glycine max] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: mitochondrial protoporphyrinogen oxidase 0.0
C-terminus
uagpf_v2_unigene12921 uagpf v2.0 674
AutoFact: rRNA-processing protein UTP23, putative n=1 Tax=Ricinus communis RepID=B9SW27_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: rrna-processing protein utp23 homolog 0.0
C-terminus
uagpf_v2_unigene13143 uagpf v2.0 725
AutoFact: WD-40 repeat-containing protein MSI1 n=8 Tax=core eudicotyledons RepID=MSI1_ARATH 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: multicopy suppressor of ira1 0.0
C-terminus
uagpf_v2_unigene13226 uagpf v2.0 572
AutoFact: putative U5 small nuclear ribonucleoprotein helicase [Arabidopsis thaliana] ref|NP_001185050.1| putative U5 small nuclear ribonucleoprotein helicase [Arabidopsis thaliana] gb|AAD30595.1|AC007369_5 Putative RNA helicase [Arabidopsis thaliana] gb|AEE30046.1 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: u5 small nuclear ribonucleoprotein helicase 0.0
C-terminus
uagpf_v2_unigene13615 uagpf v2.0 508
AutoFact: [H] COG0285 Folylpolyglutamate synthase 0.0
FL-Next: tr=Os12g0623700 protein; Oryza sativa subsp. japonica (Rice). 0.0
Blast2go: folylpolyglutamate synthase 0.0
Putative Complete
uagpf_v2_unigene13623 uagpf v2.0 277
AutoFact: Nucleosome/chromatin assembly factor group n=7 Tax=core eudicotyledons RepID=A9PHH9_POPTR 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: multicopy suppressor of ira1 0.0
Internal
uagpf_v2_unigene13682 uagpf v2.0 491
AutoFact: U5 small nuclear ribonucleoprotein component [Arabidopsis thaliana] ref|NP_849600.1| U5 small nuclear ribonucleoprotein component [Arabidopsis thaliana] gb|AAF80219.1|AC025290_8 Contains similarity to an U5 snRNP-specific protein 116 kD from Homo sapiens 0.0
FL-Next: sp=Elongation factor 2; Beta vulgaris (Sugar beet). 0.0
Blast2go: u5 small nuclear ribonucleoprotein component 0.0
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain